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* [[attachment:2009_MericoGfeller_NatureBiotechNetworkPrimer_Oct.pdf|PDF]] | * [[http://baderlab.org/Publications?action=AttachFile&do=get&target=2009_Merico_Primer_NatBiotech_Oct.pdf|PDF]] |
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* [[attachment:2007_Cytoscape_Cline_NatureProtocols_Oct.pdf|PDF]] | * [[http://baderlab.org/Publications?action=AttachFile&do=get&target=2007_Cytoscape_Cline_NatureProtocols_Oct.pdf|PDF]] |
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* [[attachment:GeneMANIA-website-NAR2010.pdf|PDF]] | * [[http://baderlab.org/Publications?action=AttachFile&do=get&target=2010_GeneMANIA_Warde-Farley_NAR_Jun.pdf|PDF]] |
Official course homepage: http://bimib.disco.unimib.it/index.php/InBiMedDoctoralCourse
- Lab resources
- Module 1 lab: (on your own)
- Module 2 lab:
Yeast gene list for DAVID lab - module1YeastGenes.txt
- Module 3 lab:
- Module 4 lab:
- Module 5 lab: GeneMANIA protocol/tutorial
- Background reading:
- Multiple Testing Correction tutorial
- Slides:
Pathways_Milan2012_Module1-GeneListIntro.ppt - PowerPoint format
Pathways_Milan2012_Module2-EnrichmentAnalysis.ppt - PowerPoint format
Pathways_Milan2012_Module3-Pathways.ppt - PowerPoint format
Pathways_Milan2012_Module4-part1-NetworkVisualizationAndAnalysis.ppt - PowerPoint format
Pathways_Milan2012_Module4-part2-EnrichmentMap-Bader.pptx - PowerPoint format
Pathways_Milan2012_Module5-Gene function prediction.ppt - PowerPoint format