##master-page:HomepageTemplate #format wiki #acl All:read == Ruth Isserlin == Email: [[RuthIsserlin/Intranet/Weekly|Weekly Updates]] Current Projects: 1. [[CellCellInteractions| Cell - Cell Interactions or Receptor - Ligand Interactions]] 1. [[UpToDateGeneSets| Automatically updated Gene sets]] 1. [[Software/EnrichmentMap|Enrichment Map]] Current Analyses: 1. [[RuthIsserlin/CancerStemCellProject/LA03|LA03/LA02 - defining ligand/receptor networks]] Old Projects: 1. [[GSEAEnrichmentMapIntegration | Modularizing and Porting EM to Cytoscape 3.0 and integrating it with GSEA]] 1. [[GSoC2014_SocialNetworkApp | Google summer of code 2014 Co-Authorship Social Network App for Cytoscape 3.0 Idea]] 1. MouseHeartPathwayProject * [[MouseHeartPathwayProject/PhosphoProteinAnalysis|Mouse Phosphoprotein Analysis]] 1. [[MouseHeartPathwayProject/PathwayAnalysisTrack|Pathway Analysis Track]] 1. GeneSets (old) 1. [[MouseHeartPathwayProject/MirAnalysisTrack|Micro RNA Analysis Track]] 1. [[MedicalDecisionMakingProject|Medical Decision Making Project]] 1. [[HumanChromatinProject | Human Chromatin Project]] 1. [[PsicQuicCytoscapePlugin | modified psicquic cytoscape plugin to compute pairwise interactions]] 1. [[GSoC2013 | Google summer of code 2013 Copublication App for Cytoscape 3.0 Idea]] 1. [[CustomePubmedSearches | What do we publish? - publication trends analyzed querying different sets of genes.]] Fun: 1. EdibleEnrichmentMaps Data: * [[Data/BINDTranslation]] * [[Data/R9cEM]] * [[Data/RoadsNotTaken]] * [[Data/ProteomicsEM]] Misc: * HumanChromatinProjectGroup * [[InstallingCytoscape32OnMacOSXSnowLeopard]] * CytoscapeWorkshopMay2016