Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos |
Phenotype | Phenotype.cls#treated_versus_cont_repos |
Upregulated in class | cont |
GeneSet | IOB|ID |
Enrichment Score (ES) | -0.85559577 |
Normalized Enrichment Score (NES) | -1.7295152 |
Nominal p-value | 0.0 |
FDR q-value | 0.107026204 |
FWER p-Value | 0.738 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | 1017 | CDK2 (cyclin-dependent kinase 2) | 2122 | 17.731 | -0.0819 | No | ||
2 | 6938 | TCF12 (transcription factor 12) | 2625 | 13.241 | -0.0897 | No | ||
3 | 3400 | "ID4 (inhibitor of DNA binding 4, dominant negative helix-loop-helix protein)" | 3971 | 6.893 | -0.1471 | No | ||
4 | 2002 | "ELK1 (ELK1, member of ETS oncogene family)" | 4167 | 6.203 | -0.1488 | No | ||
5 | 5933 | RBL1 (retinoblastoma-like 1 (p107)) | 5268 | 3.463 | -0.1985 | No | ||
6 | 6720 | SREBF1 (sterol regulatory element binding transcription factor 1) | 6174 | 2.148 | -0.2404 | No | ||
7 | 4656 | MYOG (myogenin (myogenic factor 4)) | 6837 | 1.474 | -0.2711 | No | ||
8 | 4618 | MYF6 (myogenic factor 6 (herculin)) | 7767 | 0.856 | -0.3158 | No | ||
9 | 2005 | "ELK4 (ELK4, ETS-domain protein (SRF accessory protein 1))" | 8342 | 0.598 | -0.3433 | No | ||
10 | 5076 | PAX2 (paired box 2) | 9603 | 0.228 | -0.4051 | No | ||
11 | 4617 | MYF5 (myogenic factor 5) | 9908 | 0.156 | -0.4198 | No | ||
12 | 467 | ATF3 (activating transcription factor 3) | 10681 | -0.022 | -0.4578 | No | ||
13 | 4654 | MYOD1 (myogenic differentiation 1) | 11595 | -0.233 | -0.5025 | No | ||
14 | 3428 | "IFI16 (interferon, gamma-inducible protein 16)" | 13800 | -0.900 | -0.6099 | No | ||
15 | 5079 | PAX5 (paired box 5) | 14313 | -1.140 | -0.6337 | No | ||
16 | 3280 | "HES1 (hairy and enhancer of split 1, (Drosophila))" | 14951 | -1.527 | -0.6631 | No | ||
17 | 7849 | PAX8 (paired box 8) | 15035 | -1.587 | -0.6652 | No | ||
18 | 2004 | "ELK3 (ELK3, ETS-domain protein (SRF accessory protein 2))" | 16032 | -2.540 | -0.7110 | No | ||
19 | 5925 | RB1 (retinoblastoma 1) | 17508 | -5.685 | -0.7764 | No | ||
20 | 4088 | SMAD3 (SMAD family member 3) | 18573 | -11.772 | -0.8138 | No | ||
21 | 6929 | TCF3 (transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)) | 19423 | -26.298 | -0.8220 | Yes | ||
22 | 6934 | "TCF7L2 (transcription factor 7-like 2 (T-cell specific, HMG-box))" | 19726 | -38.340 | -0.7878 | Yes | ||
23 | 5710 | "PSMD4 (proteasome (prosome, macropain) 26S subunit, non-ATPase, 4)" | 19962 | -58.242 | -0.7249 | Yes | ||
24 | 5934 | RBL2 (retinoblastoma-like 2 (p130)) | 20067 | -71.096 | -0.6391 | Yes | ||
25 | 3399 | "ID3 (inhibitor of DNA binding 3, dominant negative helix-loop-helix protein)" | 20150 | -92.868 | -0.5243 | Yes | ||
26 | 3398 | "ID2 (inhibitor of DNA binding 2, dominant negative helix-loop-helix protein)" | 20185 | -106.279 | -0.3901 | Yes | ||
27 | 3397 | "ID1 (inhibitor of DNA binding 1, dominant negative helix-loop-helix protein)" | 20316 | -310.355 | 0.0004 | Yes |