Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classcont
GeneSetMSIGDB_C2|BIOCARTA_CTL_PATHWAY
Enrichment Score (ES)-0.90687823
Normalized Enrichment Score (NES)-1.6621952
Nominal p-value0.0
FDR q-value0.18820529
FWER p-Value0.997
Table: GSEA Results Summary



Fig 1: Enrichment plot: MSIGDB_C2|BIOCARTA_CTL_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1355"FAS (Fas (TNF receptor superfamily, member 6))"38027.517-0.1630No
26955TRA@ (T cell receptor alpha locus)65711.704-0.2938No
3915"CD3D (CD3d molecule, delta (CD3-TCR complex))"80760.700-0.3655No
43683"ITGAL (integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide))"91230.352-0.4159No
5356"FASLG (Fas ligand (TNF superfamily, member 6))"91550.344-0.4163No
65551PRF1 (perforin 1 (pore forming protein))93140.302-0.4231No
7919CD247 (CD247 molecule)98650.167-0.4497No
83002"GZMB (granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1))"104540.024-0.4785No
9917"CD3G (CD3g molecule, gamma (CD3-TCR complex))"14522-1.255-0.6747No
103689"ITGB2 (integrin, beta 2 (complement component 3 receptor 3 and 4 subunit))"15270-1.772-0.7058No
11916"CD3E (CD3e molecule, epsilon (CD3-TCR complex))"16842-3.845-0.7708No
123383ICAM1 (intercellular adhesion molecule 1)17688-6.391-0.7918Yes
133105"HLA-A (major histocompatibility complex, class I, A)"20027-65.132-0.6971Yes
14567B2M (beta-2-microglobulin)20305-220.9820.0010Yes
Table: GSEA details [plain text format]



Fig 2: MSIGDB_C2|BIOCARTA_CTL_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MSIGDB_C2|BIOCARTA_CTL_PATHWAY: Random ES distribution   
Gene set null distribution of ES for MSIGDB_C2|BIOCARTA_CTL_PATHWAY