Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classcont
GeneSetGO|GO:0008083
Enrichment Score (ES)-0.69243884
Normalized Enrichment Score (NES)-1.5972655
Nominal p-value0.011235955
FDR q-value0.28972018
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO|GO:0008083   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
17422VEGFA (vascular endothelial growth factor A)97137.8870.0394No
27039"TGFA (transforming growth factor, alpha)"224416.6860.0151No
310675CSPG5 (chondroitin sulfate proteoglycan 5 (neuroglycan C))293211.4200.0075No
43481IGF2 (insulin-like growth factor 2 (somatomedin A))304810.7220.0265No
529948OSGIN1 (oxidative stress induced growth inhibitor 1)35048.7340.0242No
63976LIF (leukemia inhibitory factor (cholinergic differentiation factor))45795.039-0.0171No
76320"CLEC11A (C-type lectin domain family 11, member A)"54043.229-0.0503No
83084NRG1 (neuregulin 1)55592.980-0.0511No
92246FGF1 (fibroblast growth factor 1 (acidic))65401.738-0.0954No
101435CSF1 (colony stimulating factor 1 (macrophage))68441.465-0.1070No
113589IL11 (interleukin 11)72671.158-0.1251No
125008OSM (oncostatin M)78940.786-0.1542No
138909P11 (26 serine protease)81130.686-0.1634No
1423529CLCF1 (cardiotrophin-like cytokine factor 1)83550.592-0.1739No
153558IL2 (interleukin 2)83650.590-0.1730No
16258AMBN (ameloblastin (enamel matrix protein))84000.578-0.1733No
1727329ANGPTL3 (angiopoietin-like 3)93710.286-0.2205No
186997TDGF1 (teratocarcinoma-derived growth factor 1)94750.260-0.2250No
19265"AMELX (amelogenin (amelogenesis imperfecta 1, X-linked))"95570.239-0.2284No
202255FGF10 (fibroblast growth factor 10)95610.239-0.2280No
213569"IL6 (interleukin 6 (interferon, beta 2))"97700.188-0.2378No
223586IL10 (interleukin 10)98010.182-0.2389No
23183"AGT (angiotensinogen (serpin peptidase inhibitor, clade A, member 8))"104470.027-0.2706No
242147F2 (coagulation factor II (thrombin))10977-0.087-0.2965No
253624"INHBA (inhibin, beta A)"11106-0.122-0.3026No
2611162NUDT6 (nudix (nucleoside diphosphate linked moiety X)-type motif 6)11346-0.178-0.3139No
273593"IL12B (interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40))"11374-0.185-0.3148No
283082HGF (hepatocyte growth factor (hepapoietin A; scatter factor))11714-0.262-0.3310No
293592"IL12A (interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35))"12016-0.327-0.3450No
3010718NRG3 (neuregulin 3)12057-0.338-0.3462No
3111082ESM1 (endothelial cell-specific molecule 1)12255-0.388-0.3551No
3251816"CECR1 (cat eye syndrome chromosome region, candidate 1)"12435-0.440-0.3629No
331950EGF (epidermal growth factor (beta-urogastrone))12439-0.441-0.3620No
341270CNTF (ciliary neurotrophic factor)12516-0.460-0.3647No
354693NDP (Norrie disease (pseudoglioma))12695-0.511-0.3723No
367066THPO (thrombopoietin)12794-0.542-0.3759No
373574IL7 (interleukin 7)13019-0.612-0.3855No
382253FGF8 (fibroblast growth factor 8 (androgen-induced))13195-0.666-0.3926No
393623"INHA (inhibin, alpha)"13422-0.751-0.4020No
402668GDNF (glial cell derived neurotrophic factor)14268-1.116-0.4411No
415967REG1A (regenerating islet-derived 1 alpha)14863-1.461-0.4671No
423565IL4 (interleukin 4)14888-1.480-0.4648No
4390070LACRT (lacritin)15089-1.628-0.4709No
443714JAG2 (jagged 2)15118-1.652-0.4685No
452688GH1 (growth hormone 1)15584-2.042-0.4868No
46182JAG1 (jagged 1 (Alagille syndrome))16647-3.487-0.5311No
474192MDK (midkine (neurite growth-promoting factor 2))17178-4.699-0.5464Yes
482896GRN (granulin)20140-90.385-0.4842Yes
4922943DKK1 (dickkopf homolog 1 (Xenopus laevis))20301-214.1700.0012Yes
Table: GSEA details [plain text format]



Fig 2: GO|GO:0008083   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO|GO:0008083: Random ES distribution   
Gene set null distribution of ES for GO|GO:0008083