Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0003179
Enrichment Score (ES) | -0.9188865
Normalized Enrichment Score (NES) | -1.6139735
Nominal p-value | 0.0051282053
FDR q-value | 0.24604638
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0003179
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 4851 | "NOTCH1 (Notch homolog 1, translocation-associated (Drosophila))" |  |  | 4842 | 4.374 | -0.2289 | No
2 | 6662 | SOX9 (SRY (sex determining region Y)-box 9) |  |  | 5204 | 3.599 | -0.2388 | No
3 | 57057 | TBX20 (T-box 20) |  |  | 11211 | -0.145 | -0.5342 | No
4 | 7291 | TWIST1 (twist homolog 1 (Drosophila)) |  |  | 11483 | -0.209 | -0.5470 | No
5 | 64220 | STRA6 (stimulated by retinoic acid gene 6 homolog (mouse)) |  |  | 12115 | -0.350 | -0.5773 | No
6 | 4208 | MEF2C (myocyte enhancer factor 2C) |  |  | 14451 | -1.211 | -0.6897 | No
7 | 161882 | "ZFPM1 (zinc finger protein, multitype 1)" |  |  | 18444 | -10.759 | -0.8628 | Yes
8 | 6659 | SOX4 (SRY (sex determining region Y)-box 4) |  |  | 19584 | -30.987 | -0.8517 | Yes
9 | 3728 | JUP (junction plakoglobin) |  |  | 19987 | -61.273 | -0.7386 | Yes
10 | 1942 | EFNA1 (ephrin-A1) |  |  | 20149 | -92.632 | -0.5456 | Yes
11 | 2625 | GATA3 (GATA binding protein 3) |  |  | 20312 | -255.499 | 0.0006 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0003179
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0003179: Random ES distribution
Gene set null distribution of ES for GO|GO:0003179