Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0016620
Enrichment Score (ES) | -0.8681182
Normalized Enrichment Score (NES) | -1.638503
Nominal p-value | 0.010471204
FDR q-value | 0.24814498
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0016620
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 224 | "ALDH3A2 (aldehyde dehydrogenase 3 family, member A2)" |  |  | 3134 | 10.261 | -0.1294 | No
2 | 7915 | "ALDH5A1 (aldehyde dehydrogenase 5 family, member A1)" |  |  | 3874 | 7.198 | -0.1483 | No
3 | 64577 | "ALDH8A1 (aldehyde dehydrogenase 8 family, member A1)" |  |  | 8248 | 0.632 | -0.3621 | No
4 | 216 | "ALDH1A1 (aldehyde dehydrogenase 1 family, member A1)" |  |  | 8724 | 0.471 | -0.3843 | No
5 | 26330 | "GAPDHS (glyceraldehyde-3-phosphate dehydrogenase, spermatogenic)" |  |  | 9544 | 0.244 | -0.4240 | No
6 | 221 | "ALDH3B1 (aldehyde dehydrogenase 3 family, member B1)" |  |  | 9570 | 0.236 | -0.4247 | No
7 | 8854 | "ALDH1A2 (aldehyde dehydrogenase 1 family, member A2)" |  |  | 11150 | -0.131 | -0.5021 | No
8 | 127 | "ADH4 (alcohol dehydrogenase 4 (class II), pi polypeptide)" |  |  | 13289 | -0.696 | -0.6057 | No
9 | 223 | "ALDH9A1 (aldehyde dehydrogenase 9 family, member A1)" |  |  | 14538 | -1.264 | -0.6641 | No
10 | 218 | "ALDH3A1 (aldehyde dehydrogenase 3 family, memberA1)" |  |  | 15430 | -1.895 | -0.7034 | No
11 | 217 | ALDH2 (aldehyde dehydrogenase 2 family (mitochondrial)) |  |  | 15975 | -2.467 | -0.7242 | No
12 | 220 | "ALDH1A3 (aldehyde dehydrogenase 1 family, member A3)" |  |  | 17151 | -4.631 | -0.7708 | No
13 | 222 | "ALDH3B2 (aldehyde dehydrogenase 3 family, member B2)" |  |  | 19129 | -19.442 | -0.8209 | Yes
14 | 8659 | "ALDH4A1 (aldehyde dehydrogenase 4 family, member A1)" |  |  | 19282 | -22.472 | -0.7737 | Yes
15 | 501 | "ALDH7A1 (aldehyde dehydrogenase 7 family, member A1)" |  |  | 19689 | -36.248 | -0.7056 | Yes
16 | 128 | "ADH5 (alcohol dehydrogenase 5 (class III), chi polypeptide)" |  |  | 19739 | -38.871 | -0.6135 | Yes
17 | 4329 | "ALDH6A1 (aldehyde dehydrogenase 6 family, member A1)" |  |  | 19844 | -45.587 | -0.5078 | Yes
18 | 2597 | GAPDH (glyceraldehyde-3-phosphate dehydrogenase) |  |  | 20303 | -218.633 | 0.0011 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0016620
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0016620: Random ES distribution
Gene set null distribution of ES for GO|GO:0016620