Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0035412
Enrichment Score (ES) | -0.81812114
Normalized Enrichment Score (NES) | -1.5812044
Nominal p-value | 0.022222223
FDR q-value | 0.301015
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0035412
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 8324 | FZD7 (frizzled homolog 7 (Drosophila)) |  |  | 3360 | 9.324 | -0.1427 | No
2 | 25937 | WWTR1 (WW domain containing transcription regulator 1) |  |  | 3541 | 8.616 | -0.1306 | No
3 | 2010 | EMD (emerin) |  |  | 3549 | 8.598 | -0.1100 | No
4 | 8312 | AXIN1 (axin 1) |  |  | 5253 | 3.490 | -0.1854 | No
5 | 153090 | DAB2IP (DAB2 interacting protein) |  |  | 5291 | 3.408 | -0.1789 | No
6 | 1956 | "EGFR (epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian))" |  |  | 5292 | 3.407 | -0.1706 | No
7 | 6425 | SFRP5 (secreted frizzled-related protein 5) |  |  | 8392 | 0.582 | -0.3218 | No
8 | 6591 | SNAI2 (snail homolog 2 (Drosophila)) |  |  | 8767 | 0.455 | -0.3391 | No
9 | 1950 | EGF (epidermal growth factor (beta-urogastrone)) |  |  | 12439 | -0.441 | -0.5188 | No
10 | 10297 | APC2 (adenomatosis polyposis coli 2) |  |  | 13200 | -0.667 | -0.5546 | No
11 | 5460 | POU5F1 (POU class 5 homeobox 1) |  |  | 13341 | -0.718 | -0.5597 | No
12 | 8313 | AXIN2 (axin 2) |  |  | 13963 | -0.977 | -0.5879 | No
13 | 4088 | SMAD3 (SMAD family member 3) |  |  | 18573 | -11.772 | -0.7862 | Yes
14 | 2776 | "GNAQ (guanine nucleotide binding protein (G protein), q polypeptide)" |  |  | 19223 | -20.899 | -0.7672 | Yes
15 | 51366 | UBR5 (ubiquitin protein ligase E3 component n-recognin 5) |  |  | 19390 | -25.318 | -0.7138 | Yes
16 | 25805 | BAMBI (BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)) |  |  | 20317 | -312.036 | 0.0004 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0035412
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0035412: Random ES distribution
Gene set null distribution of ES for GO|GO:0035412