Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classtreated
GeneSetKEGG|HSA03030
Enrichment Score (ES)0.8579755
Normalized Enrichment Score (NES)1.6815622
Nominal p-value0.0
FDR q-value0.016804567
FWER p-Value0.377
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG|HSA03030   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
14175MCM6 (minichromosome maintenance complex component 6)78163.8120.1052Yes
25111PCNA (proliferating cell nuclear antigen)102146.2210.2014Yes
36742SSBP1 (single-stranded DNA binding protein 1)121130.9240.2876Yes
44176MCM7 (minichromosome maintenance complex component 7)145121.4390.3673Yes
55983"RFC3 (replication factor C (activator 1) 3, 38kDa)"215100.3380.4307Yes
64171MCM2 (minichromosome maintenance complex component 2)25991.9010.4898Yes
7246243RNASEH1 (ribonuclease H1)31983.6270.5425Yes
82237FEN1 (flap structure-specific endonuclease 1)34879.3160.5939Yes
954107"POLE3 (polymerase (DNA directed), epsilon 3 (p17 subunit))"42269.6810.6367Yes
105557"PRIM1 (primase, DNA, polypeptide 1 (49kDa))"75647.0790.6516Yes
114172MCM3 (minichromosome maintenance complex component 3)81643.8920.6779Yes
125425"POLD2 (polymerase (DNA directed), delta 2, regulatory subunit 50kDa)"91240.2180.7000Yes
134174MCM5 (minichromosome maintenance complex component 5)95438.3410.7235Yes
1410535"RNASEH2A (ribonuclease H2, subunit A)"120530.9920.7318Yes
1556655"POLE4 (polymerase (DNA-directed), epsilon 4 (p12 subunit))"125729.9450.7493Yes
165982"RFC2 (replication factor C (activator 1) 2, 40kDa)"128829.3030.7673Yes
176119"RPA3 (replication protein A3, 14kDa)"128929.2970.7868Yes
1823649"POLA2 (polymerase (DNA directed), alpha 2 (70kD subunit))"159823.9760.7876Yes
195985"RFC5 (replication factor C (activator 1) 5, 36.5kDa)"161723.6760.8024Yes
205424"POLD1 (polymerase (DNA directed), delta 1, catalytic subunit 125kDa)"186620.3340.8037Yes
214173MCM4 (minichromosome maintenance complex component 4)193819.6300.8133Yes
225558"PRIM2 (primase, DNA, polypeptide 2 (58kDa))"203118.4850.8211Yes
236118"RPA2 (replication protein A2, 32kDa)"204818.3550.8325Yes
245427"POLE2 (polymerase (DNA directed), epsilon 2 (p59 subunit))"217617.3320.8378Yes
255984"RFC4 (replication factor C (activator 1) 4, 37kDa)"233515.7350.8405Yes
265981"RFC1 (replication factor C (activator 1) 1, 145kDa)"251914.0980.8408Yes
275422"POLA1 (polymerase (DNA directed), alpha 1, catalytic subunit)"254313.9450.8490Yes
286117"RPA1 (replication protein A1, 70kDa)"254913.8880.8580Yes
2910714"POLD3 (polymerase (DNA-directed), delta 3, accessory subunit)"309710.4490.8380No
3079621"RNASEH2B (ribonuclease H2, subunit B)"45925.0030.7677No
315426"POLE (polymerase (DNA directed), epsilon)"58782.5200.7060No
321763DNA2 (DNA replication helicase 2 homolog (yeast))60492.3100.6992No
3329935"RPA4 (replication protein A4, 34kDa)"81200.6840.5976No
343978"LIG1 (ligase I, DNA, ATP-dependent)"10691-0.0240.4710No
3584153"RNASEH2C (ribonuclease H2, subunit C)"14425-1.1950.2878No
3657804"POLD4 (polymerase (DNA-directed), delta 4)"17078-4.4470.1600No
Table: GSEA details [plain text format]



Fig 2: KEGG|HSA03030   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG|HSA03030: Random ES distribution   
Gene set null distribution of ES for KEGG|HSA03030