Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classcont
GeneSetGO|GO:0034340
Enrichment Score (ES)-0.7573468
Normalized Enrichment Score (NES)-1.8129789
Nominal p-value0.0
FDR q-value0.019619454
FWER p-Value0.137
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO|GO:0034340   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
13326"HSP90AB1 (heat shock protein 90kDa alpha (cytosolic), class B member 1)"173109.6990.0346No
23716JAK1 (Janus kinase 1 (a protein tyrosine kinase))60654.8420.0349No
35781"PTPN11 (protein tyrosine phosphatase, non-receptor type 11)"66851.1180.0520No
411140CDC37 (cell division cycle 37 homolog (S. cerevisiae))79445.0740.0636No
58772FADD (Fas (TNFRSF6)-associated via death domain)80844.4950.0804No
63669ISG20 (interferon stimulated exonuclease gene 20kDa)148625.6750.0571No
75770"PTPN1 (protein tyrosine phosphatase, non-receptor type 1)"264613.0990.0050No
83661IRF3 (interferon regulatory factor 3)265513.0860.0098No
93663IRF5 (interferon regulatory factor 5)53333.348-0.1211No
105777"PTPN6 (protein tyrosine phosphatase, non-receptor type 6)"69581.373-0.2007No
115696"PSMB8 (proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7))"72191.180-0.2131No
123443"IFNA6 (interferon, alpha 6)"77570.861-0.2392No
138651SOCS1 (suppressor of cytokine signaling 1)78250.822-0.2422No
143440"IFNA2 (interferon, alpha 2)"81440.676-0.2577No
153662IRF4 (interferon regulatory factor 4)88960.417-0.2946No
163442"IFNA5 (interferon, alpha 5)"99680.144-0.3474No
177474"WNT5A (wingless-type MMTV integration site family, member 5A)"101640.093-0.3570No
183446"IFNA10 (interferon, alpha 10)"10839-0.055-0.3903No
193439"IFNA1 (interferon, alpha 1)"11441-0.201-0.4198No
203445"IFNA8 (interferon, alpha 8)"11458-0.205-0.4206No
213455"IFNAR2 (interferon (alpha, beta and omega) receptor 2)"12067-0.341-0.4504No
229021SOCS3 (suppressor of cytokine signaling 3)12244-0.385-0.4590No
233441"IFNA4 (interferon, alpha 4)"12451-0.445-0.4690No
243449"IFNA16 (interferon, alpha 16)"12618-0.489-0.4770No
253451"IFNA17 (interferon, alpha 17)"12711-0.517-0.4813No
264600MX2 (myxovirus (influenza virus) resistance 2 (mouse))13084-0.634-0.4994No
274599"MX1 (myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse))"13262-0.687-0.5079No
283444"IFNA7 (interferon, alpha 7)"13599-0.815-0.5242No
291958EGR1 (early growth response 1)13634-0.827-0.5255No
306041"RNASEL (ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent))"13797-0.896-0.5332No
3154739XAF1 (XIAP associated factor 1)14206-1.089-0.5529No
323448"IFNA14 (interferon, alpha 14)"14278-1.122-0.5559No
333452"IFNA21 (interferon, alpha 21)"14303-1.135-0.5567No
343456"IFNB1 (interferon, beta 1, fibroblast)"14732-1.384-0.5773No
353394IRF8 (interferon regulatory factor 8)15221-1.737-0.6007No
363454"IFNAR1 (interferon (alpha, beta and omega) receptor 1)"15684-2.132-0.6227No
3784166"NLRC5 (NLR family, CARD domain containing 5)"16156-2.702-0.6448No
3881844TRIM56 (tripartite motif-containing 56)16172-2.721-0.6445No
398638OASL (2'-5'-oligoadenylate synthetase-like)16666-3.527-0.6675No
407297TYK2 (tyrosine kinase 2)16697-3.598-0.6675No
416672SP100 (SP100 nuclear antigen)16717-3.632-0.6670No
423433IFIT2 (interferon-induced protein with tetratricopeptide repeats 2)17164-4.656-0.6872No
433660IRF2 (interferon regulatory factor 2)17207-4.758-0.6874No
443664IRF6 (interferon regulatory factor 6)17986-7.831-0.7228No
453659IRF1 (interferon regulatory factor 1)18007-7.943-0.7206No
463665IRF7 (interferon regulatory factor 7)18746-13.575-0.7517Yes
4711274USP18 (ubiquitin specific peptidase 18)18861-14.702-0.7516Yes
482634"GBP2 (guanylate binding protein 2, interferon-inducible)"18868-14.825-0.7460Yes
493430IFI35 (interferon-induced protein 35)19007-16.958-0.7462Yes
503437IFIT3 (interferon-induced protein with tetratricopeptide repeats 3)19104-18.975-0.7434Yes
513134"HLA-F (major histocompatibility complex, class I, F)"19233-21.099-0.7415Yes
524939"OAS2 (2'-5'-oligoadenylate synthetase 2, 69/71kDa)"19395-25.501-0.7394Yes
536773"STAT2 (signal transducer and activator of transcription 2, 113kDa)"19399-25.624-0.7294Yes
543429"IFI27 (interferon, alpha-inducible protein 27)"19448-26.932-0.7212Yes
553133"HLA-E (major histocompatibility complex, class I, E)"19478-27.797-0.7117Yes
5651447IHPK2 (inositol hexaphosphate kinase 2)19516-28.829-0.7022Yes
5757506VISA (virus-induced signaling adapter)19622-32.677-0.6945Yes
582537"IFI6 (interferon, alpha-inducible protein 6)"19662-35.028-0.6826Yes
593135"HLA-G (major histocompatibility complex, class I, G)"19863-47.478-0.6738Yes
604938"OAS1 (2',5'-oligoadenylate synthetase 1, 40/46kDa)"19903-51.434-0.6555Yes
6110581IFITM2 (interferon induced transmembrane protein 2 (1-8D))19970-58.782-0.6356Yes
623105"HLA-A (major histocompatibility complex, class I, A)"20027-65.132-0.6128Yes
633106"HLA-B (major histocompatibility complex, class I, B)"20100-78.491-0.5854Yes
644940"OAS3 (2'-5'-oligoadenylate synthetase 3, 100kDa)"20125-86.843-0.5524Yes
658519IFITM1 (interferon induced transmembrane protein 1 (9-27))20204-117.578-0.5100Yes
66103"ADAR (adenosine deaminase, RNA-specific)"20231-134.677-0.4583Yes
673107"HLA-C (major histocompatibility complex, class I, C)"20243-142.867-0.4026Yes
6810379IRF9 (interferon regulatory factor 9)20262-164.279-0.3389Yes
6910410IFITM3 (interferon induced transmembrane protein 3 (1-8U))20271-173.958-0.2708Yes
706772"STAT1 (signal transducer and activator of transcription 1, 91kDa)"20302-215.432-0.1875Yes
713434IFIT1 (interferon-induced protein with tetratricopeptide repeats 1)20306-233.172-0.0959Yes
729636ISG15 (ISG15 ubiquitin-like modifier)20309-245.8520.0008Yes
Table: GSEA details [plain text format]



Fig 2: GO|GO:0034340   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO|GO:0034340: Random ES distribution   
Gene set null distribution of ES for GO|GO:0034340