Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classtreated
GeneSetGO|GO:0006353
Enrichment Score (ES)0.74868757
Normalized Enrichment Score (NES)1.6642777
Nominal p-value0.0014367816
FDR q-value0.023403937
FWER p-Value0.564
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO|GO:0006353   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
16432"SFRS7 (splicing factor, arginine/serine-rich 7, 35kDa)"38213.9760.0809Yes
26635SNRPE (small nuclear ribonucleoprotein polypeptide E)43207.4330.1610Yes
36636SNRPF (small nuclear ribonucleoprotein polypeptide F)93154.3880.2183Yes
46426"SFRS1 (splicing factor, arginine/serine-rich 1)"119133.0170.2685Yes
510189THOC4 (THO complex 4)158117.0780.3120Yes
66634SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide 18kDa)196103.4340.3502Yes
79939RBM8A (RNA binding motif protein 8A)201102.6130.3897Yes
86427"SFRS2 (splicing factor, arginine/serine-rich 2)"27390.1070.4210Yes
96428"SFRS3 (splicing factor, arginine/serine-rich 3)"30285.6640.4528Yes
102966"GTF2H2 (general transcription factor IIH, polypeptide 2, 44kDa)"33780.9800.4825Yes
117307U2AF1 (U2 small nuclear RNA auxiliary factor 1)50961.5550.4978Yes
125435POLR2F (polymerase (RNA) II (DNA directed) polypeptide F)53160.3460.5201Yes
13902CCNH (cyclin H)53659.5430.5430Yes
145441"POLR2L (polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa)"65551.8330.5572Yes
156628SNRPB (small nuclear ribonucleoprotein polypeptides B and B1)69749.7170.5744Yes
161479"CSTF3 (cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa)"76746.2720.5889Yes
174686"NCBP1 (nuclear cap binding protein subunit 1, 80kDa)"86042.2660.6007Yes
1884172"POLR1B (polymerase (RNA) I polypeptide B, 128kDa)"92539.6180.6129Yes
197884SLBP (stem-loop binding protein)96637.9850.6256Yes
2022916"NCBP2 (nuclear cap binding protein subunit 2, 20kDa)"98637.5280.6392Yes
214116"MAGOH (mago-nashi homolog, proliferation-associated (Drosophila))"100936.6190.6523Yes
229295"SFRS11 (splicing factor, arginine/serine-rich 11)"104235.3880.6644Yes
2384967"LSM10 (LSM10, U7 small nuclear RNA associated)"106534.7190.6768Yes
2410921"RNPS1 (RNA binding protein S1, serine-rich domain)"110733.5360.6877Yes
2511338U2AF2 (U2 small nuclear RNA auxiliary factor 2)111233.3720.7004Yes
262967"GTF2H3 (general transcription factor IIH, polypeptide 3, 34kDa)"127329.6250.7040Yes
2710621"POLR3F (polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa)"131028.8240.7134Yes
285434"POLR2E (polymerase (RNA) II (DNA directed) polypeptide E, 25kDa)"132828.2680.7235Yes
298458"TTF2 (transcription termination factor, RNA polymerase II)"146126.0800.7270Yes
307270"TTF1 (transcription termination factor, RNA polymerase I)"164523.2790.7270Yes
3165109UPF3B (UPF3 regulator of nonsense transcripts homolog B (yeast))177821.3410.7287Yes
32171568POLR3H (polymerase (RNA) III (DNA directed) polypeptide H (22.9kD))191719.8100.7296Yes
336429"SFRS4 (splicing factor, arginine/serine-rich 4)"197019.1040.7344Yes
3455718POLR3E (polymerase (RNA) III (DNA directed) polypeptide E (80kD))198218.9970.7412Yes
3551362CDC40 (cell division cycle 40 homolog (S. cerevisiae))209817.9420.7425Yes
366431"SFRS6 (splicing factor, arginine/serine-rich 6)"211317.8000.7487Yes
37661"POLR3D (polymerase (RNA) III (DNA directed) polypeptide D, 44kDa)"229416.0960.7460No
3829894"CPSF1 (cleavage and polyadenylation specific factor 1, 160kDa)"272012.7110.7300No
3955703POLR3B (polymerase (RNA) III (DNA directed) polypeptide B)274312.5580.7337No
4011051NUDT21 (nudix (nucleoside diphosphate linked moiety X)-type motif 21)313910.2330.7182No
4151692"CPSF3 (cleavage and polyadenylation specific factor 3, 73kDa)"32999.5330.7140No
4225885"POLR1A (polymerase (RNA) I polypeptide A, 194kDa)"33679.2980.7143No
432968"GTF2H4 (general transcription factor IIH, polypeptide 4, 52kDa)"34169.1030.7155No
449533"POLR1C (polymerase (RNA) I polypeptide C, 30kDa)"34638.8730.7166No
4579869"FLJ12529 (pre-mRNA cleavage factor I, 59 kDa subunit)"34828.7990.7191No
4610250SRRM1 (serine/arginine repetitive matrix 1)34848.7950.7225No
474331"MNAT1 (menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis))"35838.4170.7209No
4810914PAPOLA (poly(A) polymerase alpha)38757.1870.7093No
499014"TAF1B (TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa)"41646.2130.6975No
5025888ZNF473 (zinc finger protein 473)44095.4670.6876No
519015"TAF1A (TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa)"44985.2510.6853No
525437POLR2H (polymerase (RNA) II (DNA directed) polypeptide H)45965.0000.6824No
532068"ERCC2 (excision repair cross-complementing rodent repair deficiency, complementation group 2)"51593.7020.6561No
5411128"POLR3A (polymerase (RNA) III (DNA directed) polypeptide A, 155kDa)"53183.3650.6496No
551478"CSTF2 (cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa)"54943.0740.6421No
567978MTERF (mitochondrial transcription termination factor)57152.7250.6323No
577343"UBTF (upstream binding transcription factor, RNA polymerase I)"57332.7040.6325No
589013"TAF1C (TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa)"57682.6640.6319No
5910978"CLP1 (CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae))"57832.6370.6322No
602071"ERCC3 (excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing))"59442.4390.6252No
61134353"LSM11 (LSM11, U7 small nuclear RNA associated)"60242.3460.6223No
622965"GTF2H1 (general transcription factor IIH, polypeptide 1, 62kDa)"61552.1630.6167No
635440"POLR2K (polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa)"63211.9700.6093No
64284119PTRF (polymerase I and transcript release factor)65071.7800.6008No
6511178"LZTS1 (leucine zipper, putative tumor suppressor 1)"70401.3170.5751No
668106"PABPN1 (poly(A) binding protein, nuclear 1)"98660.1670.4356No
679785DHX38 (DEAH (Asp-Glu-Ala-His) box polypeptide 38)14908-1.4910.1873No
6853981"CPSF2 (cleavage and polyadenylation specific factor 2, 100kDa)"15120-1.6540.1775No
691477"CSTF1 (cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa)"18059-8.1900.0356No
7051082"POLR1D (polymerase (RNA) I polypeptide D, 16kDa)"18825-14.3010.0033No
718683"SFRS9 (splicing factor, arginine/serine-rich 9)"18964-16.2500.0028No
726637SNRPG (small nuclear ribonucleoprotein polypeptide G)19107-18.9860.0031No
7351585"PCF11 (PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae))"19324-23.5840.0016No
744150MAZ (MYC-associated zinc finger protein (purine-binding transcription factor))19553-29.9990.0019No
751022CDK7 (cyclin-dependent kinase 7)19757-39.6000.0072No
766430"SFRS5 (splicing factor, arginine/serine-rich 5)"19923-53.6360.0199No
Table: GSEA details [plain text format]



Fig 2: GO|GO:0006353   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO|GO:0006353: Random ES distribution   
Gene set null distribution of ES for GO|GO:0006353