Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0061005
Enrichment Score (ES) | -0.8876321
Normalized Enrichment Score (NES) | -1.646085
Nominal p-value | 0.009925558
FDR q-value | 0.23433371
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0061005
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 1499 | "CTNNB1 (catenin (cadherin-associated protein), beta 1, 88kDa)" |  |  | 480 | 63.932 | 0.0625 | No
2 | 3976 | LIF (leukemia inhibitory factor (cholinergic differentiation factor)) |  |  | 4579 | 5.039 | -0.1324 | No
3 | 5155 | PDGFB (platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)) |  |  | 5374 | 3.286 | -0.1671 | No
4 | 54361 | "WNT4 (wingless-type MMTV integration site family, member 4)" |  |  | 5623 | 2.881 | -0.1754 | No
5 | 3975 | LHX1 (LIM homeobox 1) |  |  | 7692 | 0.892 | -0.2760 | No
6 | 7490 | WT1 (Wilms tumor 1) |  |  | 8559 | 0.526 | -0.3180 | No
7 | 130497 | OSR1 (odd-skipped related 1 (Drosophila)) |  |  | 9299 | 0.305 | -0.3540 | No
8 | 5076 | PAX2 (paired box 2) |  |  | 9603 | 0.228 | -0.3686 | No
9 | 3458 | "IFNG (interferon, gamma)" |  |  | 9835 | 0.174 | -0.3797 | No
10 | 5455 | POU3F3 (POU class 3 homeobox 3) |  |  | 11235 | -0.151 | -0.4484 | No
11 | 6469 | SHH (sonic hedgehog homolog (Drosophila)) |  |  | 14133 | -1.064 | -0.5896 | No
12 | 9370 | "ADIPOQ (adiponectin, C1Q and collagen domain containing)" |  |  | 14810 | -1.425 | -0.6210 | No
13 | 6943 | TCF21 (transcription factor 21) |  |  | 14828 | -1.436 | -0.6199 | No
14 | 7849 | PAX8 (paired box 8) |  |  | 15035 | -1.587 | -0.6279 | Yes
15 | 2625 | GATA3 (GATA binding protein 3) |  |  | 20312 | -255.499 | -0.5432 | Yes
16 | 10409 | "BASP1 (brain abundant, membrane attached signal protein 1)" |  |  | 20323 | -403.466 | 0.0001 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0061005
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0061005: Random ES distribution
Gene set null distribution of ES for GO|GO:0061005