Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0035850
Enrichment Score (ES) | -0.8983165
Normalized Enrichment Score (NES) | -1.5794638
Nominal p-value | 0.014962593
FDR q-value | 0.29767537
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0035850
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 1499 | "CTNNB1 (catenin (cadherin-associated protein), beta 1, 88kDa)" |  |  | 480 | 63.932 | 0.0636 | No
2 | 3976 | LIF (leukemia inhibitory factor (cholinergic differentiation factor)) |  |  | 4579 | 5.039 | -0.1313 | No
3 | 3975 | LHX1 (LIM homeobox 1) |  |  | 7692 | 0.892 | -0.2832 | No
4 | 7490 | WT1 (Wilms tumor 1) |  |  | 8559 | 0.526 | -0.3251 | No
5 | 130497 | OSR1 (odd-skipped related 1 (Drosophila)) |  |  | 9299 | 0.305 | -0.3611 | No
6 | 5076 | PAX2 (paired box 2) |  |  | 9603 | 0.228 | -0.3757 | No
7 | 3458 | "IFNG (interferon, gamma)" |  |  | 9835 | 0.174 | -0.3868 | No
8 | 9370 | "ADIPOQ (adiponectin, C1Q and collagen domain containing)" |  |  | 14810 | -1.425 | -0.6297 | No
9 | 7849 | PAX8 (paired box 8) |  |  | 15035 | -1.587 | -0.6386 | Yes
10 | 2625 | GATA3 (GATA binding protein 3) |  |  | 20312 | -255.499 | -0.5498 | Yes
11 | 10409 | "BASP1 (brain abundant, membrane attached signal protein 1)" |  |  | 20323 | -403.466 | 0.0001 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0035850
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0035850: Random ES distribution
Gene set null distribution of ES for GO|GO:0035850