Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classtreated
GeneSetGO|GO:0006403
Enrichment Score (ES)0.76311064
Normalized Enrichment Score (NES)1.687835
Nominal p-value0.0
FDR q-value0.016889425
FWER p-Value0.316
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO|GO:0006403   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
15901"RAN (RAN, member RAS oncogene family)"27250.1270.0894Yes
26432"SFRS7 (splicing factor, arginine/serine-rich 7, 35kDa)"38213.9760.1665Yes
31984EIF5A (eukaryotic translation initiation factor 5A)68172.1200.2275Yes
46426"SFRS1 (splicing factor, arginine/serine-rich 1)"119133.0170.2733Yes
510189THOC4 (THO complex 4)158117.0780.3139Yes
69939RBM8A (RNA binding motif protein 8A)201102.6130.3491Yes
787178PNPT1 (polyribonucleotide nucleotidyltransferase 1)22598.2510.3836Yes
880145THOC7 (THO complex 7 homolog (Drosophila))24394.0980.4169Yes
929074MRPL18 (mitochondrial ribosomal protein L18)26291.2610.4491Yes
106427"SFRS2 (splicing factor, arginine/serine-rich 2)"27390.1070.4813Yes
1157122NUP107 (nucleoporin 107kDa)27689.5880.5137Yes
126428"SFRS3 (splicing factor, arginine/serine-rich 3)"30285.6640.5435Yes
131977EIF4E (eukaryotic translation initiation factor 4E)30684.6410.5741Yes
148480RAE1 (RAE1 RNA export 1 homolog (S. pombe))32283.3120.6036Yes
1511260"XPOT (exportin, tRNA (nuclear export receptor for tRNAs))"36776.8440.6293Yes
167307U2AF1 (U2 small nuclear RNA auxiliary factor 1)50961.5550.6446Yes
1710772FUSIP1 (FUS interacting protein (serine/arginine-rich) 1)51161.4190.6669Yes
188563THOC5 (THO complex 5)62053.8220.6811Yes
194686"NCBP1 (nuclear cap binding protein subunit 1, 80kDa)"86042.2660.6846Yes
207884SLBP (stem-loop binding protein)96637.9850.6932Yes
2122916"NCBP2 (nuclear cap binding protein subunit 2, 20kDa)"98637.5280.7059Yes
224116"MAGOH (mago-nashi homolog, proliferation-associated (Drosophila))"100936.6190.7181Yes
239295"SFRS11 (splicing factor, arginine/serine-rich 11)"104235.3880.7293Yes
2410921"RNPS1 (RNA binding protein S1, serine-rich domain)"110733.5360.7383Yes
2511338U2AF2 (U2 small nuclear RNA auxiliary factor 2)111233.3720.7502Yes
2610657"KHDRBS1 (KH domain containing, RNA binding, signal transduction associated 1)"139627.0530.7461Yes
277263TST (thiosulfate sulfurtransferase (rhodanese))164423.3010.7423Yes
2851808"RNUXA (RNA U, small nuclear RNA export adaptor (phosphorylation regulated))"166023.1000.7500Yes
2965109UPF3B (UPF3 regulator of nonsense transcripts homolog B (yeast))177821.3410.7519Yes
3023279NUP160 (nucleoporin 160kDa)180420.9880.7583Yes
316429"SFRS4 (splicing factor, arginine/serine-rich 4)"197019.1040.7571Yes
3251362CDC40 (cell division cycle 40 homolog (S. cerevisiae))209817.9420.7573Yes
336431"SFRS6 (splicing factor, arginine/serine-rich 6)"211317.8000.7631Yes
3411269DDX19B (DEAD (Asp-Glu-Ala-As) box polypeptide 19B)252414.0800.7480No
3529894"CPSF1 (cleavage and polyadenylation specific factor 1, 160kDa)"272012.7110.7430No
3655746NUP133 (nucleoporin 133kDa)278712.2810.7442No
37636BICD1 (bicaudal D homolog 1 (Drosophila))279812.2120.7481No
3810482NXF1 (nuclear RNA export factor 1)281112.1450.7519No
3957187THOC2 (THO complex 2)303510.8170.7448No
409984THOC1 (THO complex 1)312310.3550.7443No
4123049SMG1 (PI-3-kinase-related kinase SMG-1)32119.9060.7436No
4251692"CPSF3 (cleavage and polyadenylation specific factor 3, 73kDa)"32999.5330.7427No
4310250SRRM1 (serine/arginine repetitive matrix 1)34848.7950.7368No
44399664MEX3D (mex-3 homolog D (C. elegans))38627.2520.7209No
455976UPF1 (UPF1 regulator of nonsense transcripts homolog (yeast))41486.2830.7091No
4679228THOC6 (THO complex 6 homolog (Drosophila))42066.0720.7084No
4723381"SMG5 (Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans))"42855.8610.7067No
483087HHEX (hematopoietically expressed homeobox)60952.2320.6182No
495394EXOSC10 (exosome component 10)62762.0230.6100No
5056001NXF2 (nuclear RNA export factor 2)65821.6920.5956No
5123144ZC3H3 (zinc finger CCCH-type containing 3)75160.9860.5499No
5255998NXF5 (nuclear RNA export factor 5)80430.7130.5242No
5356000NXF3 (nuclear RNA export factor 3)86880.4820.4925No
548106"PABPN1 (poly(A) binding protein, nuclear 1)"98660.1670.4345No
557248TSC1 (tuberous sclerosis 1)101790.0890.4191No
5629118DDX25 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 25)11315-0.1670.3631No
5710212DDX39 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39)12643-0.4970.2978No
583181HNRNPA2B1 (heterogeneous nuclear ribonucleoprotein A2/B1)13361-0.7270.2626No
599785DHX38 (DEAH (Asp-Glu-Ala-His) box polypeptide 38)14908-1.4910.1868No
6026019UPF2 (UPF2 regulator of nonsense transcripts homolog (yeast))14958-1.5320.1850No
6153981"CPSF2 (cleavage and polyadenylation specific factor 2, 100kDa)"15120-1.6540.1776No
623267HRB (HIV-1 Rev binding protein)15546-2.0070.1574No
632733GLE1 (GLE1 RNA export mediator homolog (yeast))16723-3.6440.1006No
6454715A2BP1 (ataxin 2-binding protein 1)16837-3.8360.0964No
656311ATXN2 (ataxin 2)17202-4.7480.0802No
6623293"SMG6 (Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans))"18036-8.0670.0420No
673178HNRNPA1 (heterogeneous nuclear ribonucleoprotein A1)18139-8.6910.0401No
689887"SMG7 (Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans))"18182-8.9460.0413No
698683"SFRS9 (splicing factor, arginine/serine-rich 9)"18964-16.2500.0086No
709793CKAP5 (cytoskeleton associated protein 5)18973-16.3880.0141No
7111163NUDT4 (nudix (nucleoside diphosphate linked moiety X)-type motif 4)19126-19.3710.0137No
723921RPSA (ribosomal protein SA)19315-23.3440.0128No
7384248FYTTD1 (forty-two-three domain containing 1)19338-23.9340.0204No
747919BAT1 (HLA-B associated transcript 1)19345-24.1180.0289No
756430"SFRS5 (splicing factor, arginine/serine-rich 5)"19923-53.6360.0199No
Table: GSEA details [plain text format]



Fig 2: GO|GO:0006403   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO|GO:0006403: Random ES distribution   
Gene set null distribution of ES for GO|GO:0006403