Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classcont
GeneSetGO|GO:0019221
Enrichment Score (ES)-0.6192812
Normalized Enrichment Score (NES)-1.7204446
Nominal p-value0.0
FDR q-value0.11107531
FWER p-Value0.804
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO|GO:0019221   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
13326"HSP90AB1 (heat shock protein 90kDa alpha (cytosolic), class B member 1)"173109.6990.0171No
284817TXNDC17 (thioredoxin domain containing 17)24693.9680.0356No
3818CAMK2G (calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma)32882.5410.0509No
49093"DNAJA3 (DnaJ (Hsp40) homolog, subfamily A, member 3)"41970.0000.0629No
56387CXCL12 (chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1))49762.3210.0737No
63716JAK1 (Janus kinase 1 (a protein tyrosine kinase))60654.8420.0812No
75781"PTPN11 (protein tyrosine phosphatase, non-receptor type 11)"66851.1180.0901No
81460"CSNK2B (casein kinase 2, beta polypeptide)"74447.3390.0975No
955540IL17RB (interleukin 17 receptor B)76146.7580.1077No
1011140CDC37 (cell division cycle 37 homolog (S. cerevisiae))79445.0740.1167No
118772FADD (Fas (TNFRSF6)-associated via death domain)80844.4950.1265No
12960CD44 (CD44 molecule (Indian blood group))112233.1750.1187No
133572"IL6ST (interleukin 6 signal transducer (gp130, oncostatin M receptor))"124830.0800.1196No
143669ISG20 (interferon stimulated exonuclease gene 20kDa)148625.6750.1138No
153717JAK2 (Janus kinase 2 (a protein tyrosine kinase))152624.9470.1177No
167804"LRP8 (low density lipoprotein receptor-related protein 8, apolipoprotein e receptor)"164823.2300.1171No
173654IRAK1 (interleukin-1 receptor-associated kinase 1)182920.7760.1131No
188986"RPS6KA4 (ribosomal protein S6 kinase, 90kDa, polypeptide 4)"207018.1180.1054No
191050"CEBPA (CCAAT/enhancer binding protein (C/EBP), alpha)"224716.6660.1006No
208877SPHK1 (sphingosine kinase 1)247414.5880.0928No
213123"HLA-DRB1 (major histocompatibility complex, class II, DR beta 1)"257913.6550.0908No
225770"PTPN1 (protein tyrosine phosphatase, non-receptor type 1)"264613.0990.0906No
233661IRF3 (interferon regulatory factor 3)265513.0860.0933No
247376"NR1H2 (nuclear receptor subfamily 1, group H, member 2)"295911.2330.0808No
256091"ROBO1 (roundabout, axon guidance receptor, homolog 1 (Drosophila))"296211.2260.0834No
267341SUMO1 (SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae))36578.1570.0508No
278792"TNFRSF11A (tumor necrosis factor receptor superfamily, member 11a, NFKB activator)"39826.8590.0363No
2881858SHARPIN (SHANK-associated RH domain interactor)41546.2430.0293No
298717TRADD (TNFRSF1A-associated via death domain)41776.1810.0296No
307187TRAF3 (TNF receptor-associated factor 3)43285.6910.0235No
313126"HLA-DRB4 (major histocompatibility complex, class II, DR beta 4)"43715.5600.0227No
328784"TNFRSF18 (tumor necrosis factor receptor superfamily, member 18)"46414.8490.0105No
338718"TNFRSF25 (tumor necrosis factor receptor superfamily, member 25)"47284.6600.0073No
343977LIFR (leukemia inhibitory factor receptor alpha)49644.102-0.0034No
353663IRF5 (interferon regulatory factor 5)53333.348-0.0209No
369253NUMBL (numb homolog (Drosophila)-like)53493.318-0.0209No
378737RIPK1 (receptor (TNFRSF)-interacting serine-threonine kinase 1)56492.848-0.0350No
385196PF4 (platelet factor 4)57412.692-0.0389No
397186TRAF2 (TNF receptor-associated factor 2)57642.669-0.0394No
402150F2RL1 (coagulation factor II (thrombin) receptor-like 1)59232.465-0.0467No
41171392ZNF675 (zinc finger protein 675)59292.457-0.0463No
423127"HLA-DRB5 (major histocompatibility complex, class II, DR beta 5)"60782.255-0.0532No
438764"TNFRSF14 (tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator))"60832.252-0.0528No
447293"TNFRSF4 (tumor necrosis factor receptor superfamily, member 4)"62662.038-0.0614No
453113"HLA-DPA1 (major histocompatibility complex, class II, DP alpha 1)"64331.847-0.0692No
4653905DUOX1 (dual oxidase 1)69271.392-0.0934No
475777"PTPN6 (protein tyrosine phosphatase, non-receptor type 6)"69581.373-0.0946No
485696"PSMB8 (proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7))"72191.180-0.1072No
493601"IL15RA (interleukin 15 receptor, alpha)"72681.158-0.1093No
501440CSF3 (colony stimulating factor 3 (granulocyte))75020.994-0.1207No
513443"IFNA6 (interferon, alpha 6)"77570.861-0.1331No
5250506DUOX2 (dual oxidase 2)78030.834-0.1351No
538651SOCS1 (suppressor of cytokine signaling 1)78250.822-0.1360No
543440"IFNA2 (interferon, alpha 2)"81440.676-0.1516No
553460IFNGR2 (interferon gamma receptor 2 (interferon gamma transducer 1))82640.626-0.1574No
564684NCAM1 (neural cell adhesion molecule 1)83220.605-0.1601No
576376CX3CL1 (chemokine (C-X3-C motif) ligand 1)83270.602-0.1601No
5823529CLCF1 (cardiotrophin-like cytokine factor 1)83550.592-0.1613No
593557IL1RN (interleukin 1 receptor antagonist)86500.496-0.1758No
6056832"IFNK (interferon, kappa)"86900.482-0.1776No
613662IRF4 (interferon regulatory factor 4)88960.417-0.1877No
623115"HLA-DPB1 (major histocompatibility complex, class II, DP beta 1)"89030.414-0.1879No
639655SOCS5 (suppressor of cytokine signaling 5)90410.371-0.1947No
642069EREG (epiregulin)91560.344-0.2002No
654502MT2A (metallothionein 2A)95880.231-0.2216No
668600"TNFSF11 (tumor necrosis factor (ligand) superfamily, member 11)"96080.227-0.2225No
673595"IL12RB2 (interleukin 12 receptor, beta 2)"96860.211-0.2263No
683569"IL6 (interleukin 6 (interferon, beta 2))"97700.188-0.2303No
697412VCAM1 (vascular cell adhesion molecule 1)97950.183-0.2315No
703458"IFNG (interferon, gamma)"98350.174-0.2334No
713442"IFNA5 (interferon, alpha 5)"99680.144-0.2399No
725724PTAFR (platelet-activating factor receptor)100870.113-0.2458No
737474"WNT5A (wingless-type MMTV integration site family, member 5A)"101640.093-0.2495No
74133396IL31RA (interleukin 31 receptor A)101930.086-0.2509No
753815KIT (v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog)102880.065-0.2555No
767133"TNFRSF1B (tumor necrosis factor receptor superfamily, member 1B)"102900.064-0.2556No
7760401EDA2R (ectodysplasin A2 receptor)104590.023-0.2639No
78342979PALM3 (Paralemmin-3)10613-0.006-0.2715No
793446"IFNA10 (interferon, alpha 10)"10839-0.055-0.2827No
805788"PTPRC (protein tyrosine phosphatase, receptor type, C)"11206-0.144-0.3008No
813439"IFNA1 (interferon, alpha 1)"11441-0.201-0.3124No
823445"IFNA8 (interferon, alpha 8)"11458-0.205-0.3132No
833553"IL1B (interleukin 1, beta)"11912-0.304-0.3356No
843455"IFNAR2 (interferon (alpha, beta and omega) receptor 2)"12067-0.341-0.3432No
85260434PYDC1 (PYD (pyrin domain) containing 1)12140-0.355-0.3467No
863598"IL13RA2 (interleukin 13 receptor, alpha 2)"12202-0.373-0.3496No
8726525"IL1F5 (interleukin 1 family, member 5 (delta))"12220-0.376-0.3504No
889021SOCS3 (suppressor of cytokine signaling 3)12244-0.385-0.3514No
893570IL6R (interleukin 6 receptor)12397-0.427-0.3589No
903441"IFNA4 (interferon, alpha 4)"12451-0.445-0.3614No
911270CNTF (ciliary neurotrophic factor)12516-0.460-0.3645No
923449"IFNA16 (interferon, alpha 16)"12618-0.489-0.3694No
933451"IFNA17 (interferon, alpha 17)"12711-0.517-0.3738No
945468PPARG (peroxisome proliferator-activated receptor gamma)12768-0.534-0.3765No
957124"TNF (tumor necrosis factor (TNF superfamily, member 2))"12777-0.537-0.3768No
962210"FCGR1B (Fc fragment of IgG, high affinity Ib, receptor (CD64))"12991-0.602-0.3872No
974600MX2 (myxovirus (influenza virus) resistance 2 (mouse))13084-0.634-0.3916No
9829965C16orf5 (chromosome 16 open reading frame 5)13099-0.638-0.3922No
994599"MX1 (myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse))"13262-0.687-0.4001No
10055504"TNFRSF19 (tumor necrosis factor receptor superfamily, member 19)"13290-0.698-0.4012No
1013552"IL1A (interleukin 1, alpha)"13376-0.731-0.4053No
1023112"HLA-DOB (major histocompatibility complex, class II, DO beta)"13515-0.781-0.4120No
1033108"HLA-DMA (major histocompatibility complex, class II, DM alpha)"13572-0.805-0.4146No
1043444"IFNA7 (interferon, alpha 7)"13599-0.815-0.4157No
1051958EGR1 (early growth response 1)13634-0.827-0.4172No
10611213IRAK3 (interleukin-1 receptor-associated kinase 3)13644-0.831-0.4174No
1076041"RNASEL (ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent))"13797-0.896-0.4247No
108163702"IL28RA (interleukin 28 receptor, alpha (interferon, lambda receptor))"13920-0.961-0.4306No
1096347CCL2 (chemokine (C-C motif) ligand 2)14056-1.027-0.4370No
1109173IL1RL1 (interleukin 1 receptor-like 1)14086-1.040-0.4382No
11110554"AGPAT1 (1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha))"14111-1.054-0.4392No
1125580"PRKCD (protein kinase C, delta)"14205-1.089-0.4436No
11354739XAF1 (XIAP associated factor 1)14206-1.089-0.4433No
1143448"IFNA14 (interferon, alpha 14)"14278-1.122-0.4466No
1153452"IFNA21 (interferon, alpha 21)"14303-1.135-0.4475No
1163109"HLA-DMB (major histocompatibility complex, class II, DM beta)"14469-1.219-0.4554No
11710148EBI3 (Epstein-Barr virus induced gene 3)14470-1.219-0.4551No
118972"CD74 (CD74 molecule, major histocompatibility complex, class II invariant chain)"14563-1.274-0.4594No
1193456"IFNB1 (interferon, beta 1, fibroblast)"14732-1.384-0.4674No
1209370"ADIPOQ (adiponectin, C1Q and collagen domain containing)"14810-1.425-0.4709No
1212209"FCGR1A (Fc fragment of IgG, high affinity Ia, receptor (CD64))"15096-1.635-0.4847No
122816CAMK2B (calcium/calmodulin-dependent protein kinase (CaM kinase) II beta)15145-1.669-0.4867No
1233394IRF8 (interferon regulatory factor 8)15221-1.737-0.4900No
1246586SLIT3 (slit homolog 3 (Drosophila))15311-1.799-0.4940No
1255771"PTPN2 (protein tyrosine phosphatase, non-receptor type 2)"15604-2.057-0.5080No
1266352CCL5 (chemokine (C-C motif) ligand 5)15672-2.117-0.5109No
1273454"IFNAR1 (interferon (alpha, beta and omega) receptor 1)"15684-2.132-0.5109No
1281271CNTFR (ciliary neurotrophic factor receptor)15728-2.183-0.5125No
1293594"IL12RB1 (interleukin 12 receptor, beta 1)"15945-2.429-0.5227No
130815CAMK2A (calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha)16092-2.630-0.5293No
13184166"NLRC5 (NLR family, CARD domain containing 5)"16156-2.702-0.5318No
1323566IL4R (interleukin 4 receptor)16270-2.853-0.5368No
1333561"IL2RG (interleukin 2 receptor, gamma (severe combined immunodeficiency))"16409-3.071-0.5429No
1344261"CIITA (class II, major histocompatibility complex, transactivator)"16562-3.334-0.5497No
1358638OASL (2'-5'-oligoadenylate synthetase-like)16666-3.527-0.5540No
1367297TYK2 (tyrosine kinase 2)16697-3.598-0.5546No
1372950GSTP1 (glutathione S-transferase pi 1)16706-3.615-0.5542No
13810062"NR1H3 (nuclear receptor subfamily 1, group H, member 3)"16711-3.622-0.5535No
1396672SP100 (SP100 nuclear antigen)16717-3.632-0.5529No
1403560"IL2RB (interleukin 2 receptor, beta)"16974-4.182-0.5647No
1411230CCR1 (chemokine (C-C motif) receptor 1)17026-4.345-0.5662No
14257007CXCR7 (chemokine (C-X-C motif) receptor 7)17141-4.610-0.5707No
1433718"JAK3 (Janus kinase 3 (a protein tyrosine kinase, leukocyte))"17148-4.623-0.5700No
1443433IFIT2 (interferon-induced protein with tetratricopeptide repeats 2)17164-4.656-0.5696No
1453660IRF2 (interferon regulatory factor 2)17207-4.758-0.5706No
1469353SLIT2 (slit homolog 2 (Drosophila))17314-5.027-0.5747No
1473111"HLA-DOA (major histocompatibility complex, class II, DO alpha)"17650-6.220-0.5899No
1483383ICAM1 (intercellular adhesion molecule 1)17688-6.391-0.5902No
1493656IRAK2 (interleukin-1 receptor-associated kinase 2)17746-6.667-0.5915No
1501907EDN2 (endothelin 2)17877-7.211-0.5962No
1513664IRF6 (interferon regulatory factor 6)17986-7.831-0.5998No
1523122"HLA-DRA (major histocompatibility complex, class II, DR alpha)"17997-7.888-0.5984No
1533659IRF1 (interferon regulatory factor 1)18007-7.943-0.5970No
1545970RELA (v-rel reticuloendotheliosis viral oncogene homolog A (avian))18184-8.954-0.6036No
1558554"PIAS1 (protein inhibitor of activated STAT, 1)"18340-9.843-0.6090No
15629108PYCARD (PYD and CARD domain containing)18363-9.973-0.6078No
15759307SIGIRR (single immunoglobulin and toll-interleukin 1 receptor (TIR) domain)18442-10.737-0.6091No
1585371PML (promyelocytic leukemia)18450-10.797-0.6070No
1597132"TNFRSF1A (tumor necrosis factor receptor superfamily, member 1A)"18699-13.075-0.6162Yes
16010555"AGPAT2 (1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta))"18732-13.452-0.6146Yes
1613665IRF7 (interferon regulatory factor 7)18746-13.575-0.6121Yes
1622633"GBP1 (guanylate binding protein 1, interferon-inducible, 67kDa)"18816-14.186-0.6122Yes
16311274USP18 (ubiquitin specific peptidase 18)18861-14.702-0.6109Yes
1642634"GBP2 (guanylate binding protein 2, interferon-inducible)"18868-14.825-0.6078Yes
1653430IFI35 (interferon-induced protein 35)19007-16.958-0.6106Yes
1665595MAPK3 (mitogen-activated protein kinase 3)19017-17.155-0.6071Yes
1673437IFIT3 (interferon-induced protein with tetratricopeptide repeats 3)19104-18.975-0.6069Yes
1687837PXDN (peroxidasin homolog (Drosophila))19182-20.211-0.6060Yes
16923236"PLCB1 (phospholipase C, beta 1 (phosphoinositide-specific))"19199-20.539-0.6020Yes
1703134"HLA-F (major histocompatibility complex, class I, F)"19233-21.099-0.5986Yes
1714939"OAS2 (2'-5'-oligoadenylate synthetase 2, 69/71kDa)"19395-25.501-0.6007Yes
1726773"STAT2 (signal transducer and activator of transcription 2, 113kDa)"19399-25.624-0.5948Yes
1733429"IFI27 (interferon, alpha-inducible protein 27)"19448-26.932-0.5909Yes
1746774STAT3 (signal transducer and activator of transcription 3 (acute-phase response factor))19451-27.002-0.5846Yes
1753133"HLA-E (major histocompatibility complex, class I, E)"19478-27.797-0.5794Yes
17651447IHPK2 (inositol hexaphosphate kinase 2)19516-28.829-0.5745Yes
1779252"RPS6KA5 (ribosomal protein S6 kinase, 90kDa, polypeptide 5)"19571-30.619-0.5700Yes
178817CAMK2D (calcium/calmodulin-dependent protein kinase (CaM kinase) II delta)19600-31.852-0.5639Yes
17957506VISA (virus-induced signaling adapter)19622-32.677-0.5573Yes
1802537"IFI6 (interferon, alpha-inducible protein 6)"19662-35.028-0.5510Yes
1813554"IL1R1 (interleukin 1 receptor, type I)"19759-39.637-0.5465Yes
18210437"IFI30 (interferon, gamma-inducible protein 30)"19766-40.310-0.5373Yes
1835355PLP2 (proteolipid protein 2 (colonic epithelium-enriched))19803-42.532-0.5291Yes
1843135"HLA-G (major histocompatibility complex, class I, G)"19863-47.478-0.5209Yes
1854938"OAS1 (2',5'-oligoadenylate synthetase 1, 40/46kDa)"19903-51.434-0.5108Yes
1863459IFNGR1 (interferon gamma receptor 1)19965-58.421-0.5001Yes
18710581IFITM2 (interferon induced transmembrane protein 2 (1-8D))19970-58.782-0.4865Yes
1883105"HLA-A (major histocompatibility complex, class I, A)"20027-65.132-0.4740Yes
189149951COMMD7 (COMM domain containing 7)20086-74.566-0.4594Yes
1903106"HLA-B (major histocompatibility complex, class I, B)"20100-78.491-0.4416Yes
1914940"OAS3 (2'-5'-oligoadenylate synthetase 3, 100kDa)"20125-86.843-0.4225Yes
1928519IFITM1 (interferon induced transmembrane protein 1 (9-27))20204-117.578-0.3988Yes
193103"ADAR (adenosine deaminase, RNA-specific)"20231-134.677-0.3685Yes
1943107"HLA-C (major histocompatibility complex, class I, C)"20243-142.867-0.3355Yes
19510379IRF9 (interferon regulatory factor 9)20262-164.279-0.2978Yes
19610410IFITM3 (interferon induced transmembrane protein 3 (1-8U))20271-173.958-0.2574Yes
197100133941CD24 (CD24 molecule)20284-192.287-0.2129Yes
1986772"STAT1 (signal transducer and activator of transcription 1, 91kDa)"20302-215.432-0.1632Yes
199567B2M (beta-2-microglobulin)20305-220.982-0.1115Yes
2003434IFIT1 (interferon-induced protein with tetratricopeptide repeats 1)20306-233.172-0.0568Yes
2019636ISG15 (ISG15 ubiquitin-like modifier)20309-245.8520.0008Yes
Table: GSEA details [plain text format]



Fig 2: GO|GO:0019221   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO|GO:0019221: Random ES distribution   
Gene set null distribution of ES for GO|GO:0019221