Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classtreated
GeneSetGO|GO:0006406
Enrichment Score (ES)0.7680585
Normalized Enrichment Score (NES)1.621178
Nominal p-value0.0014992504
FDR q-value0.0438483
FWER p-Value0.943
Table: GSEA Results Summary



Fig 1: Enrichment plot: GO|GO:0006406   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
16432"SFRS7 (splicing factor, arginine/serine-rich 7, 35kDa)"38213.9760.1016Yes
21984EIF5A (eukaryotic translation initiation factor 5A)68172.1200.1834Yes
36426"SFRS1 (splicing factor, arginine/serine-rich 1)"119133.0170.2453Yes
410189THOC4 (THO complex 4)158117.0780.3000Yes
59939RBM8A (RNA binding motif protein 8A)201102.6130.3475Yes
680145THOC7 (THO complex 7 homolog (Drosophila))24394.0980.3910Yes
76427"SFRS2 (splicing factor, arginine/serine-rich 2)"27390.1070.4332Yes
857122NUP107 (nucleoporin 107kDa)27689.5880.4764Yes
96428"SFRS3 (splicing factor, arginine/serine-rich 3)"30285.6640.5166Yes
101977EIF4E (eukaryotic translation initiation factor 4E)30684.6410.5574Yes
118480RAE1 (RAE1 RNA export 1 homolog (S. pombe))32283.3120.5969Yes
127307U2AF1 (U2 small nuclear RNA auxiliary factor 1)50961.5550.6175Yes
1310772FUSIP1 (FUS interacting protein (serine/arginine-rich) 1)51161.4190.6472Yes
148563THOC5 (THO complex 5)62053.8220.6679Yes
154686"NCBP1 (nuclear cap binding protein subunit 1, 80kDa)"86042.2660.6765Yes
167884SLBP (stem-loop binding protein)96637.9850.6897Yes
1722916"NCBP2 (nuclear cap binding protein subunit 2, 20kDa)"98637.5280.7069Yes
184116"MAGOH (mago-nashi homolog, proliferation-associated (Drosophila))"100936.6190.7235Yes
199295"SFRS11 (splicing factor, arginine/serine-rich 11)"104235.3880.7391Yes
2010921"RNPS1 (RNA binding protein S1, serine-rich domain)"110733.5360.7521Yes
2111338U2AF2 (U2 small nuclear RNA auxiliary factor 2)111233.3720.7681Yes
2265109UPF3B (UPF3 regulator of nonsense transcripts homolog B (yeast))177821.3410.7456No
2323279NUP160 (nucleoporin 160kDa)180420.9880.7545No
246429"SFRS4 (splicing factor, arginine/serine-rich 4)"197019.1040.7556No
2551362CDC40 (cell division cycle 40 homolog (S. cerevisiae))209817.9420.7580No
266431"SFRS6 (splicing factor, arginine/serine-rich 6)"211317.8000.7659No
2711269DDX19B (DEAD (Asp-Glu-Ala-As) box polypeptide 19B)252414.0800.7525No
2829894"CPSF1 (cleavage and polyadenylation specific factor 1, 160kDa)"272012.7110.7490No
2955746NUP133 (nucleoporin 133kDa)278712.2810.7517No
3010482NXF1 (nuclear RNA export factor 1)281112.1450.7564No
3157187THOC2 (THO complex 2)303510.8170.7507No
329984THOC1 (THO complex 1)312310.3550.7514No
3323049SMG1 (PI-3-kinase-related kinase SMG-1)32119.9060.7519No
3451692"CPSF3 (cleavage and polyadenylation specific factor 3, 73kDa)"32999.5330.7522No
3510250SRRM1 (serine/arginine repetitive matrix 1)34848.7950.7474No
365976UPF1 (UPF1 regulator of nonsense transcripts homolog (yeast))41486.2830.7177No
3779228THOC6 (THO complex 6 homolog (Drosophila))42066.0720.7178No
3823381"SMG5 (Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans))"42855.8610.7168No
393087HHEX (hematopoietically expressed homeobox)60952.2320.6286No
4056001NXF2 (nuclear RNA export factor 2)65821.6920.6055No
4123144ZC3H3 (zinc finger CCCH-type containing 3)75160.9860.5599No
4255998NXF5 (nuclear RNA export factor 5)80430.7130.5343No
4356000NXF3 (nuclear RNA export factor 3)86880.4820.5028No
448106"PABPN1 (poly(A) binding protein, nuclear 1)"98660.1670.4448No
4529118DDX25 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 25)11315-0.1670.3734No
4610212DDX39 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39)12643-0.4970.3082No
479785DHX38 (DEAH (Asp-Glu-Ala-His) box polypeptide 38)14908-1.4910.1972No
4826019UPF2 (UPF2 regulator of nonsense transcripts homolog (yeast))14958-1.5320.1956No
4953981"CPSF2 (cleavage and polyadenylation specific factor 2, 100kDa)"15120-1.6540.1884No
503267HRB (HIV-1 Rev binding protein)15546-2.0070.1684No
512733GLE1 (GLE1 RNA export mediator homolog (yeast))16723-3.6440.1122No
5223293"SMG6 (Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans))"18036-8.0670.0513No
539887"SMG7 (Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans))"18182-8.9460.0485No
548683"SFRS9 (splicing factor, arginine/serine-rich 9)"18964-16.2500.0178No
5584248FYTTD1 (forty-two-three domain containing 1)19338-23.9340.0110No
567919BAT1 (HLA-B associated transcript 1)19345-24.1180.0224No
576430"SFRS5 (splicing factor, arginine/serine-rich 5)"19923-53.6360.0198No
Table: GSEA details [plain text format]



Fig 2: GO|GO:0006406   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GO|GO:0006406: Random ES distribution   
Gene set null distribution of ES for GO|GO:0006406