Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos |
Phenotype | Phenotype.cls#treated_versus_cont_repos |
Upregulated in class | cont |
GeneSet | GO|GO:0008083 |
Enrichment Score (ES) | -0.69243884 |
Normalized Enrichment Score (NES) | -1.5972655 |
Nominal p-value | 0.011235955 |
FDR q-value | 0.28972018 |
FWER p-Value | 1.0 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | 7422 | VEGFA (vascular endothelial growth factor A) | 971 | 37.887 | 0.0394 | No | ||
2 | 7039 | "TGFA (transforming growth factor, alpha)" | 2244 | 16.686 | 0.0151 | No | ||
3 | 10675 | CSPG5 (chondroitin sulfate proteoglycan 5 (neuroglycan C)) | 2932 | 11.420 | 0.0075 | No | ||
4 | 3481 | IGF2 (insulin-like growth factor 2 (somatomedin A)) | 3048 | 10.722 | 0.0265 | No | ||
5 | 29948 | OSGIN1 (oxidative stress induced growth inhibitor 1) | 3504 | 8.734 | 0.0242 | No | ||
6 | 3976 | LIF (leukemia inhibitory factor (cholinergic differentiation factor)) | 4579 | 5.039 | -0.0171 | No | ||
7 | 6320 | "CLEC11A (C-type lectin domain family 11, member A)" | 5404 | 3.229 | -0.0503 | No | ||
8 | 3084 | NRG1 (neuregulin 1) | 5559 | 2.980 | -0.0511 | No | ||
9 | 2246 | FGF1 (fibroblast growth factor 1 (acidic)) | 6540 | 1.738 | -0.0954 | No | ||
10 | 1435 | CSF1 (colony stimulating factor 1 (macrophage)) | 6844 | 1.465 | -0.1070 | No | ||
11 | 3589 | IL11 (interleukin 11) | 7267 | 1.158 | -0.1251 | No | ||
12 | 5008 | OSM (oncostatin M) | 7894 | 0.786 | -0.1542 | No | ||
13 | 8909 | P11 (26 serine protease) | 8113 | 0.686 | -0.1634 | No | ||
14 | 23529 | CLCF1 (cardiotrophin-like cytokine factor 1) | 8355 | 0.592 | -0.1739 | No | ||
15 | 3558 | IL2 (interleukin 2) | 8365 | 0.590 | -0.1730 | No | ||
16 | 258 | AMBN (ameloblastin (enamel matrix protein)) | 8400 | 0.578 | -0.1733 | No | ||
17 | 27329 | ANGPTL3 (angiopoietin-like 3) | 9371 | 0.286 | -0.2205 | No | ||
18 | 6997 | TDGF1 (teratocarcinoma-derived growth factor 1) | 9475 | 0.260 | -0.2250 | No | ||
19 | 265 | "AMELX (amelogenin (amelogenesis imperfecta 1, X-linked))" | 9557 | 0.239 | -0.2284 | No | ||
20 | 2255 | FGF10 (fibroblast growth factor 10) | 9561 | 0.239 | -0.2280 | No | ||
21 | 3569 | "IL6 (interleukin 6 (interferon, beta 2))" | 9770 | 0.188 | -0.2378 | No | ||
22 | 3586 | IL10 (interleukin 10) | 9801 | 0.182 | -0.2389 | No | ||
23 | 183 | "AGT (angiotensinogen (serpin peptidase inhibitor, clade A, member 8))" | 10447 | 0.027 | -0.2706 | No | ||
24 | 2147 | F2 (coagulation factor II (thrombin)) | 10977 | -0.087 | -0.2965 | No | ||
25 | 3624 | "INHBA (inhibin, beta A)" | 11106 | -0.122 | -0.3026 | No | ||
26 | 11162 | NUDT6 (nudix (nucleoside diphosphate linked moiety X)-type motif 6) | 11346 | -0.178 | -0.3139 | No | ||
27 | 3593 | "IL12B (interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40))" | 11374 | -0.185 | -0.3148 | No | ||
28 | 3082 | HGF (hepatocyte growth factor (hepapoietin A; scatter factor)) | 11714 | -0.262 | -0.3310 | No | ||
29 | 3592 | "IL12A (interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35))" | 12016 | -0.327 | -0.3450 | No | ||
30 | 10718 | NRG3 (neuregulin 3) | 12057 | -0.338 | -0.3462 | No | ||
31 | 11082 | ESM1 (endothelial cell-specific molecule 1) | 12255 | -0.388 | -0.3551 | No | ||
32 | 51816 | "CECR1 (cat eye syndrome chromosome region, candidate 1)" | 12435 | -0.440 | -0.3629 | No | ||
33 | 1950 | EGF (epidermal growth factor (beta-urogastrone)) | 12439 | -0.441 | -0.3620 | No | ||
34 | 1270 | CNTF (ciliary neurotrophic factor) | 12516 | -0.460 | -0.3647 | No | ||
35 | 4693 | NDP (Norrie disease (pseudoglioma)) | 12695 | -0.511 | -0.3723 | No | ||
36 | 7066 | THPO (thrombopoietin) | 12794 | -0.542 | -0.3759 | No | ||
37 | 3574 | IL7 (interleukin 7) | 13019 | -0.612 | -0.3855 | No | ||
38 | 2253 | FGF8 (fibroblast growth factor 8 (androgen-induced)) | 13195 | -0.666 | -0.3926 | No | ||
39 | 3623 | "INHA (inhibin, alpha)" | 13422 | -0.751 | -0.4020 | No | ||
40 | 2668 | GDNF (glial cell derived neurotrophic factor) | 14268 | -1.116 | -0.4411 | No | ||
41 | 5967 | REG1A (regenerating islet-derived 1 alpha) | 14863 | -1.461 | -0.4671 | No | ||
42 | 3565 | IL4 (interleukin 4) | 14888 | -1.480 | -0.4648 | No | ||
43 | 90070 | LACRT (lacritin) | 15089 | -1.628 | -0.4709 | No | ||
44 | 3714 | JAG2 (jagged 2) | 15118 | -1.652 | -0.4685 | No | ||
45 | 2688 | GH1 (growth hormone 1) | 15584 | -2.042 | -0.4868 | No | ||
46 | 182 | JAG1 (jagged 1 (Alagille syndrome)) | 16647 | -3.487 | -0.5311 | No | ||
47 | 4192 | MDK (midkine (neurite growth-promoting factor 2)) | 17178 | -4.699 | -0.5464 | Yes | ||
48 | 2896 | GRN (granulin) | 20140 | -90.385 | -0.4842 | Yes | ||
49 | 22943 | DKK1 (dickkopf homolog 1 (Xenopus laevis)) | 20301 | -214.170 | 0.0012 | Yes |