Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0042744
Enrichment Score (ES) | -0.8822277
Normalized Enrichment Score (NES) | -1.5640613
Nominal p-value | 0.030470913
FDR q-value | 0.3259773
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0042744
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 3043 | "HBB (hemoglobin, beta)" |  |  | 5714 | 2.727 | -0.2672 | No
2 | 3240 | HP (haptoglobin) |  |  | 6668 | 1.617 | -0.3057 | No
3 | 4353 | MPO (myeloperoxidase) |  |  | 7249 | 1.163 | -0.3282 | No
4 | 3039 | "HBA1 (hemoglobin, alpha 1)" |  |  | 7522 | 0.981 | -0.3366 | No
5 | 337 | APOA4 (apolipoprotein A-IV) |  |  | 9500 | 0.253 | -0.4326 | No
6 | 137902 | PXDNL (peroxidasin homolog (Drosophila)-like) |  |  | 10506 | 0.013 | -0.4820 | No
7 | 2876 | GPX1 (glutathione peroxidase 1) |  |  | 13143 | -0.650 | -0.6084 | No
8 | 5052 | PRDX1 (peroxiredoxin 1) |  |  | 13433 | -0.756 | -0.6187 | No
9 | 7001 | PRDX2 (peroxiredoxin 2) |  |  | 18787 | -13.875 | -0.8104 | Yes
10 | 7837 | PXDN (peroxidasin homolog (Drosophila)) |  |  | 19182 | -20.211 | -0.7251 | Yes
11 | 2878 | GPX3 (glutathione peroxidase 3 (plasma)) |  |  | 19259 | -21.906 | -0.6154 | Yes
12 | 10935 | PRDX3 (peroxiredoxin 3) |  |  | 19308 | -23.055 | -0.4984 | Yes
13 | 847 | CAT (catalase) |  |  | 20183 | -105.906 | 0.0070 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0042744
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0042744: Random ES distribution
Gene set null distribution of ES for GO|GO:0042744