Datasetexpression_12hrs.Phenotype.cls
#treated_versus_cont.Phenotype.cls
#treated_versus_cont_repos
PhenotypePhenotype.cls#treated_versus_cont_repos
Upregulated in classtreated
GeneSetREACTOME|REACT_932.4
Enrichment Score (ES)0.8577318
Normalized Enrichment Score (NES)1.6460385
Nominal p-value0.0
FDR q-value0.03179409
FWER p-Value0.778
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME|REACT_932.4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
14175MCM6 (minichromosome maintenance complex component 6)78163.8120.1251Yes
25111PCNA (proliferating cell nuclear antigen)102146.2210.2390Yes
34176MCM7 (minichromosome maintenance complex component 7)145121.4390.3325Yes
45983"RFC3 (replication factor C (activator 1) 3, 38kDa)"215100.3380.4081Yes
54171MCM2 (minichromosome maintenance complex component 2)25991.9010.4783Yes
62237FEN1 (flap structure-specific endonuclease 1)34879.3160.5364Yes
751659GINS2 (GINS complex subunit 2 (Psf2 homolog))42469.2840.5873Yes
89837GINS1 (GINS complex subunit 1 (Psf1 homolog))73147.8330.6098Yes
95557"PRIM1 (primase, DNA, polypeptide 1 (49kDa))"75647.0790.6457Yes
104172MCM3 (minichromosome maintenance complex component 3)81643.8920.6773Yes
115425"POLD2 (polymerase (DNA directed), delta 2, regulatory subunit 50kDa)"91240.2180.7043Yes
124174MCM5 (minichromosome maintenance complex component 5)95438.3410.7325Yes
135982"RFC2 (replication factor C (activator 1) 2, 40kDa)"128829.3030.7391Yes
146119"RPA3 (replication protein A3, 14kDa)"128929.2970.7622Yes
1523649"POLA2 (polymerase (DNA directed), alpha 2 (70kD subunit))"159823.9760.7659Yes
165985"RFC5 (replication factor C (activator 1) 5, 36.5kDa)"161723.6760.7836Yes
175424"POLD1 (polymerase (DNA directed), delta 1, catalytic subunit 125kDa)"186620.3340.7874Yes
184173MCM4 (minichromosome maintenance complex component 4)193819.6300.7994Yes
195558"PRIM2 (primase, DNA, polypeptide 2 (58kDa))"203118.4850.8094Yes
206118"RPA2 (replication protein A2, 32kDa)"204818.3550.8230Yes
218318CDC45L (CDC45 cell division cycle 45-like (S. cerevisiae))215117.4750.8318Yes
225984"RFC4 (replication factor C (activator 1) 4, 37kDa)"233515.7350.8351Yes
235981"RFC1 (replication factor C (activator 1) 1, 145kDa)"251914.0980.8372Yes
245422"POLA1 (polymerase (DNA directed), alpha 1, catalytic subunit)"254313.9450.8470Yes
256117"RPA1 (replication protein A1, 70kDa)"254913.8880.8577Yes
2610714"POLD3 (polymerase (DNA-directed), delta 3, accessory subunit)"309710.4490.8390No
2784296GINS4 (GINS complex subunit 4 (Sld5 homolog))44135.4610.7785No
281763DNA2 (DNA replication helicase 2 homolog (yeast))60492.3100.6998No
293978"LIG1 (ligase I, DNA, ATP-dependent)"10691-0.0240.4711No
3057804"POLD4 (polymerase (DNA-directed), delta 4)"17078-4.4470.1600No
Table: GSEA details [plain text format]



Fig 2: REACTOME|REACT_932.4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME|REACT_932.4: Random ES distribution   
Gene set null distribution of ES for REACTOME|REACT_932.4