Dataset | expression_12hrs.Phenotype.cls #treated_versus_cont.Phenotype.cls #treated_versus_cont_repos
Phenotype | Phenotype.cls#treated_versus_cont_repos
Upregulated in class | cont
GeneSet | GO|GO:0035004
Enrichment Score (ES) | -0.86404735
Normalized Enrichment Score (NES) | -1.6039927
Nominal p-value | 0.013227513
FDR q-value | 0.27009967
FWER p-Value | 1.0
Table: GSEA Results Summary

Fig 1: Enrichment plot: GO|GO:0035004
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
1 | 5291 | "PIK3CB (phosphoinositide-3-kinase, catalytic, beta polypeptide)" |  |  | 5193 | 3.637 | -0.2442 | No
2 | 5288 | "PIK3C2G (phosphoinositide-3-kinase, class 2, gamma polypeptide)" |  |  | 5346 | 3.327 | -0.2412 | No
3 | 5293 | "PIK3CD (phosphoinositide-3-kinase, catalytic, delta polypeptide)" |  |  | 6554 | 1.725 | -0.2951 | No
4 | 8660 | IRS2 (insulin receptor substrate 2) |  |  | 6936 | 1.386 | -0.3095 | No
5 | 5294 | "PIK3CG (phosphoinositide-3-kinase, catalytic, gamma polypeptide)" |  |  | 9313 | 0.302 | -0.4256 | No
6 | 50852 | TRAT1 (T cell receptor associated transmembrane adaptor 1) |  |  | 11032 | -0.100 | -0.5098 | No
7 | 5289 | "PIK3C3 (phosphoinositide-3-kinase, class 3)" |  |  | 11363 | -0.182 | -0.5255 | No
8 | 146850 | "PIK3R6 (phosphoinositide-3-kinase, regulatory subunit 6)" |  |  | 12696 | -0.511 | -0.5895 | No
9 | 472 | ATM (ataxia telangiectasia mutated) |  |  | 14773 | -1.406 | -0.6872 | No
10 | 23533 | "PIK3R5 (phosphoinositide-3-kinase, regulatory subunit 5)" |  |  | 15674 | -2.122 | -0.7249 | No
11 | 5290 | "PIK3CA (phosphoinositide-3-kinase, catalytic, alpha polypeptide)" |  |  | 17764 | -6.773 | -0.8063 | Yes
12 | 3667 | IRS1 (insulin receptor substrate 1) |  |  | 17930 | -7.532 | -0.7906 | Yes
13 | 5295 | "PIK3R1 (phosphoinositide-3-kinase, regulatory subunit 1 (alpha))" |  |  | 19422 | -26.295 | -0.7810 | Yes
14 | 5287 | "PIK3C2B (phosphoinositide-3-kinase, class 2, beta polypeptide)" |  |  | 19510 | -28.588 | -0.6949 | Yes
15 | 5296 | "PIK3R2 (phosphoinositide-3-kinase, regulatory subunit 2 (beta))" |  |  | 19918 | -53.218 | -0.5468 | Yes
16 | 8503 | "PIK3R3 (phosphoinositide-3-kinase, regulatory subunit 3 (gamma))" |  |  | 20275 | -179.372 | 0.0025 | Yes
Table: GSEA details [plain text format]

Fig 2: GO|GO:0035004
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: GO|GO:0035004: Random ES distribution
Gene set null distribution of ES for GO|GO:0035004