#acl All:read <> = Education = ||1998-2002 ||[[http://www.utoronto.ca/|University of Toronto]] ||Toronto, Ontario || || ||'''Ph.D. Biochemistry''' ||Bioinformatics || |||||| || ||1993 - 1997 ||[[http://www.mcgill.ca/|McGill University]] ||Montreal, Quebec || || ||'''B.Sc. Biochemistry, Computer Science''' || || |||||| || = Research = ||Apr 2006-present ||[[http://www.utoronto.ca/|University of Toronto]] ||Toronto, Ontario || || ||'''Professor''' ||[[http://thedonnellycentre.utoronto.ca|The Donnelly Centre]] || |||| ||[[http://www.utoronto.ca/medicalgenetics/|Department of Molecular Genetics]] || |||| ||[[http://compbio.cs.utoronto.ca/|Computational Biology]] at the [[http://www.cs.toronto.edu/DCS/index.html|Department of Computer Science]] || || ||'''Associate Member''' ||[[http://www.mshri.on.ca/|Lunenfeld Tanenbaum Research Institute]], [[http://www.mtsinai.on.ca/|Mount Sinai Hospital]], Toronto || || ||||Biological pathway and network analysis, protein interaction prediction, network evolution || |||||| || ||Dec 2002-Mar 2006 ||[[http://www.mskcc.org/|Memorial Sloan-Kettering Cancer Center]] ||New York, NY || || ||'''Post-Doctoral Fellow''' ||[[http://www.cbio.mskcc.org/|Computational Biology Center]] || || ||Supervisor: [[http://cbio.mskcc.org/people/info/chris_sander.html|Chris Sander]] || || ||||Biological pathway and network informatics, protein interaction prediction || |||||| || ||Sep 1998-Oct 2002 ||[[http://www.utoronto.ca/|University of Toronto]], [[http://www.mshri.on.ca/|Samuel Lunenfeld Research Institute]] ||Toronto, Ontario || || ||'''Ph.D.''' ||[[http://www.biochemistry.utoronto.ca/|Biochemistry]] || || ||Supervisor: Christopher W.V. Hogue || || ||||Development and use of the Biomolecular Interaction Network Database (BIND) [[attachment:baderBINDThesis.pdf]] || |||||| || = Publications = <> = Conference Organization = * July 16-19, 2008 * The 6th Annual Cytoscape Conference (~80 participants) * CCBR, University of Toronto * 2003-present * 14 BioPAX workshops (~10-30 participants) * New York, Chicago, San Francisco, Denver, Detroit, Tokyo * September 8-9, 2004 * The 2nd Annual Cytoscape Conference (~40 participants) * MSKCC, New York, NY = Journal Reviewer = Applied Bioinformatics, Bioessays, Biosilico, Bioinformatics, BMC Bioinformatics, Briefings in Bioinformatics, Expert Opinion on Therapeutic Targets, FEBS Letters, Genome Biology, Molecular and Cellular Proteomics, Nucleic Acids Research, Nature, Nature Biotechnology, Nature Molecular Systems Biology, Pacific Symposium on Biocomputing, PLoS Biology, PLoS Computational Biology, PNAS, Science = Journal Editor = * [[http://www.biomedcentral.com/bmcresnotes/edboard/|Associate Editor, BMC Research Notes]] * DATABASE - The Journal of Biological Databases and Curation * [[http://msb.embopress.org/editors|Editorial Board, Molecular Systems Biology]] * [[http://www.liebertpub.com/SYSM|Editorial Board, Systems Medicine]] = Committees = * '''Conference:''' [[http://www.yeast-meet.org/2010/pages/program.shtml|Yeast Genetics and Molecular Biology Meeting, Organizing Committee]] - Vancouver, July 2010 * '''Conference:''' [[http://compbio.mit.edu/recombsat/|4th Dialogue on Reverse Engineering Assessment and Methods (DREAM4), Program Committee]] - Boston, 2009 * '''Conference:''' [[http://www.iscb.org/ismbeccb2009/committee_organizing.php|Intelligent Systems for Molecular Biology (ISMB) 2009, Program Committee]] - Stockholm, Sweden, 2009 * '''Conference:''' [[http://mlaa.com.au/giw2008/GIW%20ConferenceCommittees.htm|19th International Conference on Genome Informatics, Program committee]] - Singapore, Dec.2008 * '''Conference:''' [[http://wiki.c2b2.columbia.edu/dream/index.php/The_3rd_DREAM_Conference|3rd Dialogue on Reverse Engineering Assessment and Methods (DREAM3), Program Committee]] - Boston, 2008 * '''Conference:''' [[http://www.yeast-meet.org/|Yeast Genetics and Molecular Biology Meeting, Organizing Committee]] - Toronto, July 2008 * '''Conference:''' [[http://www.iscb.org/ismb2008/special_sessions.php#session3|Interaction Networks and disease Special Session at ISMB Conference, Organizer]] - Toronto, July 2008 * '''Conference:''' [[http://www.nyas.org/events/eventDetail.asp?eventID=10232&date=12/3/2007|2nd Dialogue on Reverse Engineering Assessment and Methods (DREAM2), Program Committee]] - New York, 2007 * '''Conference:''' [[http://www.comp.nus.edu.sg/~giw2007/|18th International Conference on Genome Informatics, Program committee]] - Singapore, Dec.2007 * '''Conference:''' [[http://caprimeeting.ccb.sickkids.ca/|3rd CAPRI evaluation meeting, Organizing committee]] - Toronto, Apr.2007 * '''Conference:''' [[http://chianti.ucsd.edu/recombsysbio06/index.html|RECOMB Satellite Conference on: Systems Biology and Computational Proteomics, Program Committee]] - San Diego, Dec.2006 * '''Conference:''' [[http://magnet.c2b2.columbia.edu/news/DREAMInitiative.pdf|Dialogue on Reverse Engineering Assessment and Methods (DREAM), Program Committee]] - New York, 2006 * '''Conference:''' [[http://ismb2006.cbi.cnptia.embrapa.br/|Intelligent Systems for Molecular Biology (ISMB) 2006, Program Committee]] - Fortaleza, Brazil, 2006 * '''Conference:''' [[http://research.calit2.net/recomb-workshop05/|The First Annual RECOMB Satellite Workshop on Systems Biology and The Second Annual RECOMB Satellite Workshop on Regulatory Genomics, Program Committee]] - San Diego, Nov.2005 * '''Conference:''' [[http://www.iscb.org/ismb2005/|Intelligent Systems for Molecular Biology (ISMB) 2005, Program Committee]], Detroit, USA, 2005 * '''Standard:''' Biological Pathway Exchange Standards Initiative (BioPAX) - http://www.biopax.org/ * '''Standard:''' Proteomics Standards Initiative Molecular Interactions (PSI-MI) - http://psidev.sourceforge.net/ * '''Consortium:''' Board Member, [[http://www.proteinmodules.org/|Protein Modules Consortium]] - From 2005 * '''Consortium:''' Board Member, [[http://cytoscape.org|The Cytoscape Consortium]] - From 2006