#acl All:read DanieleMerico:write,delete,revert
= Gene Set Collections =
 * [[attachment:GO_KEGG_NCI_TopReact_PFAM_Hs_eg_Max700_Min5.GMT|GO; KEGG, NCI, Reactome-Top Pathways; PFAM Domains]]
   * GO, KEGG, PFAM from Bioconductor; NCI from web-site; Reactome top pathways from web-site
   * filtered max 700 min 5
   * used in CNV-Nature analysis (3,493 sets effectively tested)
   * 6,129 sets (14,433 before size filtering)
 * [[attachment:GO_Pathways_PFAM_Hs_eg.GMT|GO; KEGG, NCI, Biocarta, Reactome-All Pathways, PFAM Domains]]
   * GO, KEGG, PFAM from Bioconductor; NCI from web-site; Reactome, Biocarta from `WhichGenes`
   * not filtered
   * 15,640 sets