#acl MagaliMichaut:read,write,delete,revert All:read
#format wiki
== Peer-reviewed journal ==

=== 2011 ===

'''Protein Complexes are Central in the Yeast Genetic Landscape''', <<BR>>'''Michaut M.''', Baryshnikova A., Costanzo M., Myers C.L., Andrews B.J., Boone C., Bader G.D.; <<BR>>[[http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1001092|PLoS Computational Biology 7(2): e1001092 Feb 24 2011]] <<BR>> [[http://www.ploscompbiol.org/article/browseIssue.action?issue=info%3Adoi%2F10.1371%2Fissue.pcbi.v07.i02|February 2011 Issue Cover]] <<BR>> 

'''Bringing order to protein disorder through comparative genomics and genetic interactions''', <<BR>>Bellay J*, Han S*, '''Michaut M*''', Kim T, Costanzo M, Andrews BJ, Boone C, Bader GD, Myers CL, Kim PM;<<BR>>[[http://genomebiology.com/2011/12/2/R14/abstract|Genome Biology 12(2):R14 Feb 15 2011]]<<BR>>[[http://www.ncbi.nlm.nih.gov/pubmed/21324131|PubMed]] 


=== 2010 ===

'''Highlights from the Sixth International Society for Computational Biology (ISCB) Student Council Symposium''', <<BR>> Klijn C., Abeel T. and '''Michaut M.''';<<BR>>[[http://www.biomedcentral.com/1471-2105/11?issue=S10| BMC Bioinformatics, 2010, 11(Suppl 10) 7 Dec 2010)]]

=== 2009 ===

'''The !IntAct molecular interaction database in 2010''', <<BR>>Aranda B, Achuthan P, Alam-Faruque Y, Armean I, Bridge A, Derow C, Feuermann M, Ghanbarian AT, Kerrien S, Khadake J, Kerssemakers J, Leroy C, Menden M, '''Michaut M''', Montecchi-Palazzi L, Neuhauser SN, Orchard S, Perreau V, Roechert B, van Eijk K, Hermjakob H.; '''NAR''' (Oct. 2009).
[[http://www.ncbi.nlm.nih.gov/pubmed/19850723| Pubmed]]

'''Genome wide location analysis reveals a role for Sub1 in RNA polymerase III transcription''', <<BR>> Tavenet A., Suleau A., Dubreuil G., Ferrari R., Ducrot C., '''Michaut M.''', Aude J.C., Dieci G., Lefebvre O., Conesa C., Acker J.; '''PNAS''', 106(34):14265-70 (Aug. 2009) [[http://www.ncbi.nlm.nih.gov/pubmed/19706510|PubMed]] [[http://www.pnas.org/content/106/34/14265.long|PNAS]]

=== 2008 ===
'''Highlights from the Fourth International Society for Computational Biology (ISCB) Student Council Symposium''', <<BR>> '''Michaut M.''', Kerrien S., Montecchi-Palazzi L., Chauvat F., Cassier-Chauvat C., Aude J.C., Legrain P., Hermjakob H.; '''BMC Bioinformatics''', 2008, 9(Suppl 10):P1 (Oct. 2008).

'''Genome-wide location analysis reveals a novel role of TFIIS in RNA polymerase III transcription''', <<BR>> Ghavi-Helm Y., '''Michaut M.''', Acker J., Aude J.C., Thuriaux P., Werner M. and Soutourina J.; '''Genes & Development''', 22(14):1934-47 (Jul. 2008) [[http://www.ncbi.nlm.nih.gov/pubmed/18628399|PubMed]] [[http://genesdev.cshlp.org/content/22/14/1934.long|Genes&Dev]]

'''InteroPORC: Automated Inference of Highly Conserved Protein Interaction Networks''', <<BR>> '''Michaut M.''', Kerrien S., Montecchi-Palazzi L., Chauvat F., Cassier-Chauvat C., Aude J.C., Legrain P., Hermjakob H.; '''Bioinformatics''', 24(14): 1625-1631 (Jul. 2008) [[http://www.ncbi.nlm.nih.gov/pubmed/18508856|PubMed]] [[http://bioinformatics.oxfordjournals.org/content/24/14/1625.long|Bioinformatics]]

=== 2007 ===
'''Cadmium triggers an integrated reprogramming of the metabolism of ''Synechocystis'' PCC6803, under the control of the Slr1738 regulator''', <<BR>> Houot L., Floutier M., Marteyn B., '''Michaut M.''', Picciocchi A., Legrain P., Aude J.C., Cassier-Chauvat C., Chauvat F.; '''BMC Genomics''', 24(14): 1625-1631 (Oct. 2007) [[http://www.ncbi.nlm.nih.gov/pubmed/17910763|PubMed]] [[http://www.biomedcentral.com/1471-2164/8/350|BioMed Central]]

== Peer-reviewed conference ==
=== 2010 ===
'''Functional and structural disorder: comparative genomics and genetic interactions distinguish functional roles of disorder''', <<BR>> J. Bellay, S. Han, '''M. Michaut''', G. D. Bader, C. L. Myers, P. M. Kim; '''JOBIM 2010'''.

'''Exploring the Monochromatic Landscape in Yeast using Genetic Interactions and Known Processes Reveals the Importance of Protein Complexes''', <<BR>> '''Michaut M.''', A.Baryshnikova, M. Costanzo, C. L. Myers, B. Andrews, C. Boone, G. D. Bader; '''JOBIM 2010'''.
=== 2008 ===
'''Inference of ''Synechocystis'' protein interaction network''', <<BR>> '''Michaut M.''', Kerrien S., Montecchi-Palazzi L., Chauvat F., Cassier-Chauvat C., Aude J.C., Legrain P., Hermjakob H.; '''JOBIM 2008''', pages 99-104.

=== 2007 ===
'''Inference and validation of ''Synechocystis'' protein interaction network using orthology''', <<BR>> '''Michaut M.''', Kerrien S., Montecchi-Palazzi L., Chauvat F., Cassier-Chauvat C., Aude J.C., Legrain P., Hermjakob H.; '''JOBIM 2007''', pages 229-234.

== Book chapter ==

=== 2007 ===
'''Mining biological data using pyramids''', <<BR>> Polaillon G., Vescovo L., '''Michaut M.''', Aude J.C.; in Studies in Classification, Data Analysis, and Knowledge Organization, '''Springer-Verlag''', pages 397-408 (September 2007).

== Other ==

=== 2008 ===
'''Transcriptomic and proteomic data analysis to study responses to oxidative stress and heavy metals''', <<BR>> '''Michaut M.''', PhD thesis, University of Orsay (November 2008)