#acl All:read DanieleMerico:write,delete,revert
= Papers to Read =
== Pathway And Network Analysis ==
 * Characterizing regulatory path motifs in integrated networks using perturbational data <<BR>>
 Genome Biology <<BR>>
 http://genomebiology.com/2010/11/3/R32/abstract
== Enrichment Analysis ==
 * GO-Bayes: Gene Ontology-based overrepresentation analysis using a Bayesian approach
 Bioinformatics Oxford <<BR>>
 http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/7/905?etoc
== Autism And Neurobiology ==
 * Gene Expression Signature database <<BR>>
 Genome Biology <<BR>>
 http://genomebiology.com/2007/8/7/R133
== Genetics and Association Studies ==
== Genome Sequence ==
 * Genome-wide functional analysis of human 5' untranslated region introns <<BR>>
 Genome Biology <<BR>>
 http://genomebiology.com/2010/11/3/R29
== Transcriptomics And Microarray Analysis ==
 * Conserved developmental transcriptomes in evolutionary divergent species <<BR>>
 Genome Biology <<BR>>
 http://genomebiology.com/2010/11/3/R35
 * Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data
 Bioinformatics Oxford <<BR>>
 http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/7/896?etoc
== Expression Regulation and Epigenomics ==
 * ChIPs and regulatory bits <<BR>>
 Nature Biotechnology <<BR>>
 http://www.nature.com/nbt/journal/v28/n2/full/nbt0210-142.html
== Cancer ==
 * Tumour microenvironment: Macrophages lead the way <<BR>>
 Nature Reviews <<BR>>
 http://www.nature.com/nrc/journal/v10/n3/full/nrc2816.html

 * Dissecting cancer through mathematics: from the cell to the animal model <<BR>>
 Nature Reviews <<BR>>
 http://www.nature.com/nrc/journal/v10/n3/full/nrc2808.html

== Old Stack ==

{{{

GENERAL INTEREST

http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VRT-4YK7PTR-4&_user=994540&_coverDate=03%2F11%2F2010&_rdoc=1&_fmt=high&_orig=search&_sort=d&_docanchor=&view=c&_acct=C000050024&_version=1&_urlVersion=0&_userid=994540&md5=1fe2cec854708aaa237fb5f71fcd8771

http://www.sciencemag.org/cgi/content/abstract/science.1186802v1

http://www.nature.com/nrg/journal/v11/n4/full/nrg2771.html

http://www.nature.com/nrg/journal/v11/n4/full/nrg2773.html#Disease-susceptibility

http://www.nature.com/nrg/journal/v11/n4/full/nrg2773.html#Human-genetic-variation

http://www.nature.com/nrg/series/gwas/index.html

http://www.nature.com/nrg/journal/v11/n4/full/nrg2750.html

http://www.nature.com/nature/journal/v464/n7288/full/nature08845.html

http://www.nature.com/nrc/journal/v10/n4/full/nrc2817.html

http://www.nature.com/nrc/journal/v10/n4/full/nrc2820.html

AUTISM

http://www.nature.com/nrn/journal/v11/n4/full/nrn2807.html

http://stke.sciencemag.org/cgi/content/abstract/sigtrans;2/68/ra19?view=abstract

http://www.jbc.org/content/280/7/5972

http://www.nature.com/nrn/journal/v11/n4/full/nrn2805.html

COMPUTATIONAL GENETICS

http://www.nature.com/ng/journal/vaop/ncurrent/abs/ng.546.html

http://www.nature.com/ng/journal/vaop/ncurrent/abs/ng.548.html

MIRNA

http://genome.cshlp.org/content/18/4/610.abstract?ijkey=60b3fac85112a114551a20387b808134d0b63c4a&keytype2=tf_ipsecsha

OTHER GENERAL INTEREST

http://bib.oxfordjournals.org/cgi/content/full/11/2/210?etoc

http://bib.oxfordjournals.org/cgi/content/full/11/2/181?etoc

http://genomebiology.com/2010/11/2/R23/abstract

BisoGenet: a new tool for gene network building, visualization and analysis

Lists2Networks: Integrated analysis of gene/protein lists

}}}