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== Peer-reviewed journals ==

=== 2009 ===

=== 2008 ===
'''Synchronization and Spectral Coarse Graining in Oscillator Networks'''<<BR>> Gfeller D, De Los Rios P; '''Phys. Rev. Lett.''' 100, 174104 (2008) [[attachment:Sync-Gfeller-PRL-2008.pdf|PDF]]

=== 2007 ===

'''Spectral Coarse Graining of Complex Networks'''<<BR>> Gfeller D, De Los Rios P; '''Phys. Rev. Lett.''' 99, 038701 (2007) [[attachment:SCG-Gfeller-PRL-2007.pdf|PDF]]

'''Uncovering the topology of configuration space networks'''<<BR>>
Gfeller D, Morton de Lachapelle D, De Los Rios P, Caldarelli P, Rao F; '''Phys. Rev. E''' 76, 026113 (2007) [[attachment:ConfNet-Gfeller-PRE-2007.pdf|PDF]]

'''Complex Network Analysis of Free-energy Landscapes'''<<BR>> Gfeller D, De Los Rios P, Caflisch A, Rao F;
'''PNAS''' 104, 1817-1822 (2007) [[attachment:Alanine-Gfeller-PNAS-2007.pdf|PDF]]

=== 2005 ===

'''Finding instabilities in the community structure of complex networks'''<<BR>>
Gfeller D, Chappelier J-C, De Los Rios P; '''Phys. Rev. E''' 72 056135 (2005) [[attachment:Instabilities-Gfeller-PRE-2005.pdf|PDF]]


== Thesis ==

'''Simplifying complex networks: form a clustering to a coarse graining strategy''' Gfeller D, PhD Thesis.<<BR>>
EPFL Doctoral School Award (2007 EPFL's two best thesis). [[attachment:thesis-Gfeller-2007.pdf|PDF]]

== Conference papers ==

'''Synonym Dictionary Improvement through  Markov Clustering and Clustering Stability'''<<BR>> Gfeller D, Chappelier J-C, De Los Rios P; Proceedings of International Symposium an Applied Stochastic Models and Data Analysis (ASMDA'05) (2005) [[attachment:Ling-Gfeller-ASMDA-2005.pdf|PDF]]

== Conference talks and Seminar ==

Seminar at University of Z\"urich", Switzerland, 2005<<BR>>
Seminar at Max Planck Institute, Leipzig, 2006<<BR>>
Seminar at Boston University, 2006<<BR>>
Talk at International Workshop on Structure and Function of complex networks, 2006, Torino, Italy<<BR>>
Talk at International School of Complexity, Biological Networks, 2006, Erice, Italy<<BR>>
Talk at Biowire 2007, Cambridge, UK<<BR>>
Seminar at University of Toronto, Canada, 2007<<BR>>
Seminar at McGill, Montreal, Canada, 2007<<BR>>