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| = Toronto Computational Biology Seminars = | #acl All:read This page focuses on the Toronto Computational Biology community. A central computational biology site has been set up at http://www.compbio.utoronto.ca/ which has more up to date information than this site. |
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| We maintain an up to date list of [:Seminars:computational biology relevant seminars in Toronto]. You can subscribe to the page to get e-mail alerts whenever a new seminar is added, or you can subscribe to the RSS feed for this website at the RecentChanges page. ["Seminars"] |
= Seminars = An up to date list of computational biology relevant seminars in Toronto is maintained at http://compbio.cs.toronto.edu/cbl/events.htm (in a Google Calendar). |
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| * [http://www.biochemistry.utoronto.ca/department/cette_semaine.html Cette Semaine] * [http://www.utoronto.ca/reg/notices_main.pl University of Toronto Web Notice System] maintains seminars for a few departments * [http://www.utoronto.ca/reg/list_notices.pl?dept=chem&time_frame=year Chemistry] * [http://www.utoronto.ca/reg/list_notices.pl?dept=csci&time_frame=year Computer Science] * [http://www.utoronto.ca/reg/list_notices.pl?dept=medicine&time_frame=year Medicine] * [http://www.utoronto.ca/reg/list_notices.pl?dept=stats&time_frame=year Statistics] * [http://www.utoronto.ca/reg/list_notices.pl?dept=botany&dept=csci&dept=ihpst&dept=maths&dept=medicine&dept=stats&dept=zoology&dept=chem&dept=cgcs&dept=kmdi&dept=medgen&dept=physics&time_frame=year multiple departments] |
* [[http://cettesemaine.utoronto.ca/|Cette Semaine]] * [[http://www.utoronto.ca/reg/notices_main.pl|University of Toronto Web Notice System]] maintains seminars for a few departments * [[http://www.utoronto.ca/reg/list_notices.pl?dept=chem&time_frame=year|Chemistry]] * [[http://www.utoronto.ca/reg/list_notices.pl?dept=csci&time_frame=year|Computer Science]] * [[http://www.utoronto.ca/reg/list_notices.pl?dept=medicine&time_frame=year|Medicine]] * [[http://www.utoronto.ca/reg/list_notices.pl?dept=stats&time_frame=year|Statistics]] * [[http://www.utoronto.ca/reg/list_notices.pl?dept=botany&dept=csci&dept=ihpst&dept=maths&dept=medicine&dept=stats&dept=zoology&dept=chem&dept=cgcs&dept=kmdi&dept=medgen&dept=physics&time_frame=year|multiple departments]] * [[http://www.mshri.on.ca/mitacs/seminars/SEMINARS.HTML|Statistical methods for genomics at SLRI]] * [[http://www.fields.utoronto.ca/programs/scientific/CMM/06-07/|Centre for Mathematical Medicine seminars]] |
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| A [[Conferences|list of conferences]] that members of the Bader lab will attend or have attended is on the [[Conferences]] page. | |
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| A [:Conferences:list of conferences] that members of the Bader lab will attend or have attended is on the ["Conferences"] page. | = Courses = The University of Toronto [[Courses|offers a number of courses and programs]] in computational biology. |
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| = Toronto Bioinformatics Community = | Seneca College also offers a [[http://bioinformatics.senecac.on.ca/|bioinformatics program]]. |
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| ||Gary Bader||http://baderlab.org||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Biomolecular interaction networks and pathways|| ||Anthony Bonner|| ||Computer Science||Computational biology algorithms, machine learning|| ||Michael Brudno|| ||Computer Science, Donnelly Centre for Cellular and Biomedical Research||Computational biology algorithms|| ||Hue-Sun Chan|| ||Biochemistry||Computational protein folding|| ||Andrew Emili|| ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Proteomics, functional genomics, bioinformatics, mass spectrometry|| ||Brendan Frey|| ||Electrical and Computer Engineering, Donnelly Centre for Cellular and Biomedical Research||Bayesian networks, machine learning|| ||Celia Greenwood|| ||Hospital for Sick Children|| || ||David Guttman|| ||Botany||Comparative and Evolutionary Genomics, Molecular Evolution|| ||Chris Hogue|| ||Biochemistry||Molecular interaction database, pathway simulation, protein folding|| ||Tim Hughes|| ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Functional genomics using gene expression microarrays|| ||Igor Jurisica|| ||Ontario Cancer Institute @ MaRS, Computer Science|| || ||David McMillen|| ||, Mississauga|| ||Quaid Morris|| ||Donnelly Centre for Cellular and Biomedical Research, Computer Science|| || ||John Parkinson|| ||Hospital for Sick Children @ MaRS|| || ||Regis Pomes|| ||Hospital for Sick Children||Molecular dynamics simulations of proteins|| ||Nicholas Provart|| ||Botany||Arabidopsis thaliana|| || ||Steve Scherer|| ||Hospital for Sick Children @ MaRS, The Centre for Applied Genomics|| || ||Boris Steipe|| ||Biochemistry, Molecular and Medical Genetics||Structural Bioinformatics, Protein engineering|| || ||Elisabeth Tillier|| ||University Health Network @ MaRS|| || ||Thodoros Topaloglou|| ||Mechanical and Industrial Engineering|| || ||Mike Tyers|| ||Samuel Lunenfeld Research Institute|| || ||Shoshana Wodak|| ||Hospital for Sick Children|| || ||Zhaolei Zhang|| ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best|| || |
The University of Waterloo [[http://www.math.uwaterloo.ca/navigation/Prospective/programs/bioinfo.shtml|undergraduate bioinformatics co-op program]] and [[http://monod.uwaterloo.ca/|bioinformatics research group]]. = Toronto Computational Biology Community = == University of Toronto == ||<#e0e0ff style="font-weight: bold; text-align: center;">Mainly computational ||||||<#e0e0ff style="text-align: center;"> || ||[[http://baderlab.org|Gary Bader]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Molecular Genetics, Computer Science ||Biomolecular interaction networks and pathways, molecular profiles, cancer || ||[[http://www.oicr.on.ca/research/batada.htm|Nizar Batada]] ||Ontario Institute for Cancer Research ||Epigenetics, noncoding RNA, genomics || ||[[http://www.cs.toronto.edu/~bonner/|Anthony Bonner]] ||Computer Science ||Computational biology algorithms, machine learning || ||[[http://www.cs.toronto.edu/~brudno/|Michael Brudno]] ||Computer Science, Donnelly Centre for Cellular and Biomedical Research ||Computational biology algorithms || ||[[http://ashercutter.net/|Asher Cutter]] ||Ecology & Evolutionary Biology ||Evolutionary genetics || ||[[http://biochemistry.utoronto.ca/chan/bch.html|Hue-Sun Chan]] ||Biochemistry, Medical Genetics ||Computational protein folding || ||[[http://www.psi.toronto.edu/|Brendan Frey]] ||Electrical and Computer Engineering, Donnelly Centre for Cellular and Biomedical Research ||Bayesian networks, machine learning algorithms || ||[[http://www.cs.toronto.edu/~juris/|Igor Jurisica]] ||Ontario Cancer Institute @ MaRS, Computer Science ||Cancer informatics || ||[[http://www.kimlab.org/|Philip Kim]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Molecular Genetics, Computer Science ||Biological networks, genomics, protein structure and function || ||[[http://www.cs.toronto.edu/~lilien/|Ryan Lilien]] ||Donnelly Centre for Cellular and Biomedical Research, Computer Science, Banting and Best ||Computational structural biology || ||[[http://web.chem-eng.utoronto.ca/index.php?option=com_content&task=view&id=650&Itemid=62|Radhakrishnan Mahadevan]] ||Chemical Engineering, IBBME ||Systems analysis and engineering of biological processes, bacterial metabolic flux analysis || ||[[http://www.utm.utoronto.ca/~mcmillen/|David McMillen]] ||UofT, Mississauga ||Quantitive biology, cell system simulation || ||[[http://www.psi.toronto.edu/~quaid/|Quaid Morris]] ||Donnelly Centre for Cellular and Biomedical Research, Computer Science ||Machine learning algorithms || ||[[http://labs.eeb.utoronto.ca/moses/|Alan Moses]] ||Cell and Systems Biology, Computer Science ||Sequence analysis, evolution || ||[[http://www.oicr.on.ca/aboutOicr_Staff.htm|Francis Ouellette]] ||Ontario Institute of Cancer Research ||Databases, gene finding || ||[[http://www.biochemistry.utoronto.ca/parkinson/lab/|John Parkinson]] ||Hospital for Sick Children @ MaRS, Medical Genetics ||Comparative genomics, cell system simulation || ||[[http://biochemistry.utoronto.ca/pomes/bch.html|Regis Pomes]] ||Hospital for Sick Children ||Molecular dynamics simulations of proteins || ||[[http://www.botany.utoronto.ca/ResearchLabs/ProvartLab|Nicholas Provart]] ||Cell and Systems Biology ||Arabidopsis thaliana gene expression analysis || ||[[http://biochemistry.utoronto.ca/steipe/|Boris Steipe]] ||Biochemistry, Medical Genetics ||Structural bioinformatics, protein engineering || ||[[http://www.cs.toronto.edu/~roweis/|Sam Roweis]] ||Computer Science ||Machine learning, Analysis of large datasets || ||[[http://www.uhnresearch.ca/labs/tillier/home.htm|Elisabeth Tillier]] ||University Health Network @ MaRS ||Molecular evolution || ||[[http://www.mie.utoronto.ca/staff/profiles/thodoros/|Thodoros Topaloglou]] ||Mechanical and Industrial Engineering ||Data management || ||[[http://biochemistry.utoronto.ca/wodak/bch.html|Shoshana Wodak]] ||Hospital for Sick Children, Medical Genetics ||Transcription factor-DNA binding, protein docking and engineering || ||[[http://www.utoronto.ca/zhanglab/|Zhaolei Zhang]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Comparative genomics, evolution, regulatory element prediction || ||<#e0e0ff style="font-weight: bold; text-align: center;">Mainly wet lab ||||||<#e0e0ff style="text-align: center;"> || ||[[http://www.utoronto.ca/andrewslab/|Brenda Andrews]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Genetic and physical interactions in yeast || ||[[http://www.utoronto.ca/boonelab/|Charlie Boone]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Genetic and physical interactions in yeast || ||[[http://lambda.med.utoronto.ca/Davidson/|Alan Davidson]] ||Biochemistry, Medical Genetics ||Protein folding, protein interactions || ||[[http://www.ecf.utoronto.ca/~sdavies/|Stephen Davies]] ||Institute for Biomaterials and Biomedical Engineering ||Genetic ciruits, DNA computing || ||[[http://www.botany.utoronto.ca/ResearchLabs/guttmanLab/|David Guttman]] ||Cell and Systems Biology ||Comparative and evolutionary genomics, molecular evolution || ||[[http://www.utoronto.ca/emililab/|Andrew Emili]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Proteomics, functional genomics, bioinformatics, mass spectrometry || ||[[http://chemogenomics.med.utoronto.ca/|Guri Giaever]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Chemical genomics/genetics || ||[[http://www.utoronto.ca/medicalgenetics/PIs/GREENBLA.HTM|Jack Greenblatt]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Proteomics, transcription regulation || ||[[http://biochemistry.utoronto.ca/houry/Labpage/index.html|Walid Houry]] ||Biochemistry ||Molecular chapersones || ||[[http://hugheslab.med.utoronto.ca/|Tim Hughes]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Functional genomics using gene expression microarrays || ||[[http://chemogenomics.med.utoronto.ca/|Corey Nislow]] ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics ||Chemical genomics/genetics || ||[[http://pawsonlab.mshri.on.ca/|Tony Pawson]] ||Samuel Lunenfeld Research Institute, Medical Genetics ||Cell signaling, protein interaction domains || ||[[http://xtal.oci.utoronto.ca/prive/index.html|Gil Privé]] ||Ontario Cancer Institute ||X-ray crystallography || ||[[http://www.tcag.ca/scherer/|Steve Scherer]] ||Hospital for Sick Children @ MaRS, The Centre for Applied Genomics, Medical Genetics ||Human genetics || ||[[http://www.utoronto.ca/cancyto/|Jeremy Squire]] ||Princess Margaret Hospital ||Microarrays and cancer || ||[[http://www.wlstanfordlab.com/|William Stanford]] ||Institute of Biomaterials and Biomedical Engineering ||Mouse mutants, stem cells || ||[[http://individual.utoronto.ca/ktruong/|Kevin Truong]] ||Institute of Biomaterials and Biomedical Engineering, Electrical and Computer Engineering ||Protein engineering, bioinformatics || ||[[http://www.mshri.on.ca/tyers/|Mike Tyers]] ||Samuel Lunenfeld Research Institute, Medical Genetics ||Cell division in yeast, proteomics, interaction databases || ||[[http://kinase.uhnres.utoronto.ca/|Jim Woodgett]] ||Samuel Lunenfeld Research Institute, Medical Genetics ||Protein kinases, DNA microarrays || ||[[http://www.mshri.on.ca/bios/Wrana.html|Jeff Wrana]] ||Samuel Lunenfeld Research Institute, Medical Genetics ||TGF-beta pathway, protein interaction networks || ||[[http://bigten.med.utoronto.ca|Christopher Yip]] ||Institute of Biomaterials and Biomedical Engineering ||Single molecule imaging, protein assembly || ||<#e0e0ff style="font-weight: bold; text-align: center;">Biostats and epidemiology ||||||<#e0e0ff style="text-align: center;"> || ||[[http://142.150.180.17/faculty_template.asp?GetFile=BJoseph|Joseph Beyene]] ||Hospital for Sick Children ||Interest in gene expression microarray analysis || ||[[http://www.mshri.on.ca/?page=Dr.%20Laurent%20Briollais|Laurent Briollais]] ||Samuel Lunenfeld Research Institute ||Genetic interactions, graphical models || ||[[http://www.mshri.on.ca/mitacs/members/profiles.html|Shelley Bull]] ||Samuel Lunenfeld Research Institute ||Statistical genetics, microarray analysis || ||[[http://142.150.180.17/faculty_template.asp?GetFile=GCelia|Celia Greenwood]] ||Hospital for Sick Children ||Genetic epidemiology, microarray analysis || ||[[http://fisher.utstat.toronto.edu/~rafal/welcome.html|Rafal Kustra]] ||Public Health Sciences ||Mining large datasets, microarray analysis || ||[[http://www.mshri.on.ca/bios/Mclaughlin.html|John McLaughlin]] ||Samuel Lunenfeld Research Institute ||Statistical genetics and cancer || ||[[http://www.uhnres.utoronto.ca/researchers/profile.php?lookup=6094|David Tritchler]] ||Princess Margaret Hospital ||Interest in gene expression microarray analysis || ||<#e0e0ff style="font-weight: bold; text-align: center;">Bioethics ||||||<#e0e0ff style="text-align: center;"> || ||[[http://www.utoronto.ca/jcb/about/singer.htm|Peter Singer]] ||Joint Centre for Bioethics ||Genomics and global health || ||<#e0e0ff style="font-weight: bold; text-align: center;">Centres ||||||<#e0e0ff style="text-align: center;"> || ||[[http://www.ccb.sickkids.ca/|Centre for Computational Biology]] ||Hospital for Sick Children ||Support and services || ||[[http://www.phenogenomics.ca|Toronto Centre for Phenogenomics]] ||SLRI, UHN, !SickKids, St. Michael's ||Mouse phenogenomics || ||[[http://www.cmhd.ca/|Centre for Modeling Human Disease]] ||Centre for Phenogenomics ||Gene trap database || ||[[http://www.ehealthinnovation.org/|Centre for Global eHealth Innovation]] ||University Health Network, University of Toronto ||eHealth || ||[[http://www.ocbn.ca/|Ontario Cancer Biomarker Network]] ||MaRS ||Cancer Biomarkers || ||[[http://www.crio.on.ca/|Cancer Research Institute of Ontario]] ||MaRS ||Coming soon || ||[[http://www.fields.utoronto.ca/programs/scientific/CMM/|Centre for Mathematical Medicine]] ||Fields Institute ||Medical Applications of Math || |
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| ||See the [http://cbio.ca/ Computational Biology Institute of Ontario] [http://cbio.ca/community.html community website],[[BR]] organized by Boris Steipe, for an Ontario-wide list.||attachment:CBIO_Logo_Name.gif|| ||See the [http://bioinformatics.ca/ bioinformatics.ca] [http://bioinformatics.ca/bioinformatics_resources/people/ community website],[[BR]] organized by Francis Ouellette, for a Canada-wide list.||attachment:bioinfoca.jpg|| ||||||||<(>'''Chemiinformatics'''|| ||Advanced Chemistry Development||https://www.acdlabs.com/||110 Yonge Street, 14th floor||Chemistry software|| ||||||||<(>'''Biomedical graphics'''|| ||AXS Biomedical Animation Studio||http://axs3d.com/||MaRS building||Biomedical 3D animation|| ||UofT Biomedical Communications program||http://www.bmc.med.utoronto.ca/BMC/||UofT MSB||M.Sc. program|| ||||||||<(>'''General'''|| ||MaRS Discovery District (Medical and Related Services)||http://www.marsdd.com/||MaRS building||Biotechnology hub|| |
== York University == ||[[http://www.cs.yorku.ca/~datta/|Suprakash Datta]] ||Computer Science ||Genomic signal processing || ||[[http://www.math.yorku.ca/~jgrigull/|Jörg Grigull]] ||Mathematics and Statistics ||Microarray analysis || ||[[http://gl.yorku.ca:8008/GlMedia.nsf/DeptInformationTechnology/3FBEFA57B9F7327E85256A22006C0EF6?OpenDocument|Mariana Kant]] ||Computer Science ||Databases, algorithms || ||[[http://www.math.yorku.ca/Who/Faculty/Whiteley/menu.html|Walter Whiteley]] ||Mathematics and Statistics ||Protein structure || |
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| == Sites == ||See the [[http://www.torontobiotech.org/|Toronto Biotechnology Initiative]]||<style="text-align: center;"> || ||See the [[http://cbio.ca/|Computational Biology Institute of Ontario]] [[http://cbio.ca/community.html|community website]],<<BR>> organized by Boris Steipe, for an Ontario-wide list. ||<style="text-align: center;"> {{attachment:CBIO_Logo_Name.gif}} || ||See the [[http://bioinformatics.ca/|bioinformatics.ca]] [[http://bioinformatics.ca/bioinformatics_resources/people/|community website]],<<BR>> organized by Francis Ouellette, for a Canada-wide list. ||<style="text-align: center;"> {{attachment:bioinfoca.jpg}} || ||See the [[http://www.gchelpdesk.ualberta.ca/|Canadian Bioinformatics Help Desk]] for help with bioinformatics tools || {{attachment:helpdesk.jpg}} || |
|
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| = Toronto Restaurants = *only good ones + reviews |
== Companies == ||<#e0e0ff style="font-weight: bold; text-align: center;">Bioinformatics ||||||<#e0e0ff style="text-align: center;"> || ||Unleashed Informatics ||http://unleashedinformatics.com/||200 Elm Street ||Bioinformatics databases e.g. BIND, !SeqHound || ||Benetech ||http://www.benetech.com/||180 Bloor St. W. Suite 500 ||Clinical software, LIMS || ||cStar Technologies ||http://www.cstartech.com/||1122 Finch Ave. W. ||Wireless sample tracking || ||<#e0e0ff style="font-weight: bold; text-align: center;">Clinical informatics ||||||<#e0e0ff style="text-align: center;"> || ||!McDougall Scientific ||http://www.mcd-sci.on.ca||789 Don Mills Rd. Suite 305 ||Clinical statistical analysis, data management || ||Medical Databanks ||http://www.medicaldatabanks.com/||880 Ellesmere Rd., 3rd Floor ||Clinical research, data management || ||!RamSoft ||http://www.ramsoft.biz/||243 College Street, Suite 100 ||Medical imaging software || ||<#e0e0ff style="font-weight: bold; text-align: center;">Chemiinformatics ||||||<#e0e0ff style="text-align: center;"> || ||Advanced Chemistry Development ||https://www.acdlabs.com/||110 Yonge Street, 14th floor ||Chemistry software || ||!SimBioSys ||http://www.simbiosys.ca/||135 Queen's Plate Drive Unit 520 ||Computational chemistry, docking || ||<#e0e0ff style="font-weight: bold; text-align: center;">Biomedical graphics ||||||<#e0e0ff style="text-align: center;"> || ||AXS Biomedical Animation Studio ||http://axs3d.com/||MaRS building ||Biomedical 3D animation || ||<#e0e0ff style="font-weight: bold; text-align: center;">Genomics ||||||<#e0e0ff style="text-align: center;"> || ||!ChondroGene ||http://www.chondrogene.com/||800 Petrolia Road (401 & Keele) ||Molecular diagnostics || ||!CombiMatrix ||http://www.combimatrix.com/||MaRS||Custom DNA microarrays || ||Tm Bioscience ||http://www.tmbioscience.com/||439 University Ave, Suite 900 ||DNA-based diagnostics || ||<#e0e0ff style="font-weight: bold; text-align: center;">Proteomics ||||||<#e0e0ff style="text-align: center;"> || ||MDS Sciex ||http://www.mdssciex.com||71 Four Valley Drive, Concord, ON ||Mass spectrometry instruments/software || ||Infochromics ||http://www.infochromics.com/||MaRS building ||Proteomics data analysis software || ||<#e0e0ff style="font-weight: bold; text-align: center;">Pharmaceutical ||||||<#e0e0ff style="text-align: center;"> || ||Sanofi Pasteur ||http://www.sanofipasteur.ca/sanofi-pasteur/front/index.jsp?siteCode=AVP_CA&lang=EN&codeRubrique=85||1755 Steeles Avenue West ||Vaccine development || ||<#e0e0ff style="font-weight: bold; text-align: center;">Biotech hubs ||||||<#e0e0ff style="text-align: center;"> || ||MaRS Discovery District (Medical and Related Services) ||http://www.marsdd.com/||MaRS building ||Biotechnology hub || |
This page focuses on the Toronto Computational Biology community. A central computational biology site has been set up at http://www.compbio.utoronto.ca/ which has more up to date information than this site.
Seminars
An up to date list of computational biology relevant seminars in Toronto is maintained at http://compbio.cs.toronto.edu/cbl/events.htm (in a Google Calendar).
Additional seminar lists:
University of Toronto Web Notice System maintains seminars for a few departments
Conferences
A list of conferences that members of the Bader lab will attend or have attended is on the Conferences page.
Courses
The University of Toronto offers a number of courses and programs in computational biology.
Seneca College also offers a bioinformatics program.
The University of Waterloo undergraduate bioinformatics co-op program and bioinformatics research group.
Toronto Computational Biology Community
University of Toronto
Mainly computational |
|
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Molecular Genetics, Computer Science |
Biomolecular interaction networks and pathways, molecular profiles, cancer |
||
Ontario Institute for Cancer Research |
Epigenetics, noncoding RNA, genomics |
||
Computer Science |
Computational biology algorithms, machine learning |
||
Computer Science, Donnelly Centre for Cellular and Biomedical Research |
Computational biology algorithms |
||
Ecology & Evolutionary Biology |
Evolutionary genetics |
||
Biochemistry, Medical Genetics |
Computational protein folding |
||
Electrical and Computer Engineering, Donnelly Centre for Cellular and Biomedical Research |
Bayesian networks, machine learning algorithms |
||
Ontario Cancer Institute @ MaRS, Computer Science |
Cancer informatics |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Molecular Genetics, Computer Science |
Biological networks, genomics, protein structure and function |
||
Donnelly Centre for Cellular and Biomedical Research, Computer Science, Banting and Best |
Computational structural biology |
||
Chemical Engineering, IBBME |
Systems analysis and engineering of biological processes, bacterial metabolic flux analysis |
||
UofT, Mississauga |
Quantitive biology, cell system simulation |
||
Donnelly Centre for Cellular and Biomedical Research, Computer Science |
Machine learning algorithms |
||
Cell and Systems Biology, Computer Science |
Sequence analysis, evolution |
||
Ontario Institute of Cancer Research |
Databases, gene finding |
||
Hospital for Sick Children @ MaRS, Medical Genetics |
Comparative genomics, cell system simulation |
||
Hospital for Sick Children |
Molecular dynamics simulations of proteins |
||
Cell and Systems Biology |
Arabidopsis thaliana gene expression analysis |
||
Biochemistry, Medical Genetics |
Structural bioinformatics, protein engineering |
||
Computer Science |
Machine learning, Analysis of large datasets |
||
University Health Network @ MaRS |
Molecular evolution |
||
Mechanical and Industrial Engineering |
Data management |
||
Hospital for Sick Children, Medical Genetics |
Transcription factor-DNA binding, protein docking and engineering |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Comparative genomics, evolution, regulatory element prediction |
||
Mainly wet lab |
|
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Genetic and physical interactions in yeast |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Genetic and physical interactions in yeast |
||
Biochemistry, Medical Genetics |
Protein folding, protein interactions |
||
Institute for Biomaterials and Biomedical Engineering |
Genetic ciruits, DNA computing |
||
Cell and Systems Biology |
Comparative and evolutionary genomics, molecular evolution |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Proteomics, functional genomics, bioinformatics, mass spectrometry |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Chemical genomics/genetics |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Proteomics, transcription regulation |
||
Biochemistry |
Molecular chapersones |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Functional genomics using gene expression microarrays |
||
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Chemical genomics/genetics |
||
Samuel Lunenfeld Research Institute, Medical Genetics |
Cell signaling, protein interaction domains |
||
Ontario Cancer Institute |
X-ray crystallography |
||
Hospital for Sick Children @ MaRS, The Centre for Applied Genomics, Medical Genetics |
Human genetics |
||
Princess Margaret Hospital |
Microarrays and cancer |
||
Institute of Biomaterials and Biomedical Engineering |
Mouse mutants, stem cells |
||
Institute of Biomaterials and Biomedical Engineering, Electrical and Computer Engineering |
Protein engineering, bioinformatics |
||
Samuel Lunenfeld Research Institute, Medical Genetics |
Cell division in yeast, proteomics, interaction databases |
||
Samuel Lunenfeld Research Institute, Medical Genetics |
Protein kinases, DNA microarrays |
||
Samuel Lunenfeld Research Institute, Medical Genetics |
TGF-beta pathway, protein interaction networks |
||
Institute of Biomaterials and Biomedical Engineering |
Single molecule imaging, protein assembly |
||
Biostats and epidemiology |
|
||
Hospital for Sick Children |
Interest in gene expression microarray analysis |
||
Samuel Lunenfeld Research Institute |
Genetic interactions, graphical models |
||
Samuel Lunenfeld Research Institute |
Statistical genetics, microarray analysis |
||
Hospital for Sick Children |
Genetic epidemiology, microarray analysis |
||
Public Health Sciences |
Mining large datasets, microarray analysis |
||
Samuel Lunenfeld Research Institute |
Statistical genetics and cancer |
||
Princess Margaret Hospital |
Interest in gene expression microarray analysis |
||
Bioethics |
|
||
Joint Centre for Bioethics |
Genomics and global health |
||
Centres |
|
||
Hospital for Sick Children |
Support and services |
||
SLRI, UHN, SickKids, St. Michael's |
Mouse phenogenomics |
||
Centre for Phenogenomics |
Gene trap database |
||
University Health Network, University of Toronto |
eHealth |
||
MaRS |
Cancer Biomarkers |
||
MaRS |
Coming soon |
||
Fields Institute |
Medical Applications of Math |
||
York University
Computer Science |
Genomic signal processing |
|
Mathematics and Statistics |
Microarray analysis |
|
Computer Science |
Databases, algorithms |
|
Mathematics and Statistics |
Protein structure |
Sites
See the Toronto Biotechnology Initiative |
|
See the Computational Biology Institute of Ontario community website, |
|
See the bioinformatics.ca community website, |
|
See the Canadian Bioinformatics Help Desk for help with bioinformatics tools |
|
Companies
Bioinformatics |
|
||
Unleashed Informatics |
http://unleashedinformatics.com/||200 Elm Street |
Bioinformatics databases e.g. BIND, SeqHound |
|
Benetech |
http://www.benetech.com/||180 Bloor St. W. Suite 500 |
Clinical software, LIMS |
|
cStar Technologies |
http://www.cstartech.com/||1122 Finch Ave. W. |
Wireless sample tracking |
|
Clinical informatics |
|
||
McDougall Scientific |
http://www.mcd-sci.on.ca||789 Don Mills Rd. Suite 305 |
Clinical statistical analysis, data management |
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Medical Databanks |
http://www.medicaldatabanks.com/||880 Ellesmere Rd., 3rd Floor |
Clinical research, data management |
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RamSoft |
http://www.ramsoft.biz/||243 College Street, Suite 100 |
Medical imaging software |
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Chemiinformatics |
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Advanced Chemistry Development |
https://www.acdlabs.com/||110 Yonge Street, 14th floor |
Chemistry software |
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SimBioSys |
http://www.simbiosys.ca/||135 Queen's Plate Drive Unit 520 |
Computational chemistry, docking |
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Biomedical graphics |
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AXS Biomedical Animation Studio |
http://axs3d.com/||MaRS building |
Biomedical 3D animation |
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Genomics |
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ChondroGene |
http://www.chondrogene.com/||800 Petrolia Road (401 & Keele) |
Molecular diagnostics |
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CombiMatrix |
http://www.combimatrix.com/||MaRS||Custom DNA microarrays |
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Tm Bioscience |
http://www.tmbioscience.com/||439 University Ave, Suite 900 |
DNA-based diagnostics |
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Proteomics |
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MDS Sciex |
http://www.mdssciex.com||71 Four Valley Drive, Concord, ON |
Mass spectrometry instruments/software |
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Infochromics |
http://www.infochromics.com/||MaRS building |
Proteomics data analysis software |
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Pharmaceutical |
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Sanofi Pasteur |
http://www.sanofipasteur.ca/sanofi-pasteur/front/index.jsp?siteCode=AVP_CA&lang=EN&codeRubrique=85||1755 Steeles Avenue West |
Vaccine development |
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Biotech hubs |
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MaRS Discovery District (Medical and Related Services) |
http://www.marsdd.com/||MaRS building |
Biotechnology hub |
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