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| = Toronto Computational Biology Seminars = | #acl All:read This page focuses on the Toronto Computational Biology community. |
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| We maintain an up to date list of [:Seminars:computational biology relevant seminars in Toronto]. You can subscribe to the page to get e-mail alerts whenever a new seminar is added, or you can subscribe to the RSS feed for this website at the RecentChanges page. | = Seminars = |
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| ["Seminars"] | An up to date list of computational biology relevant seminars in Toronto is maintained at http://compbio.cs.toronto.edu/cbl/events.htm (in a Google Calendar). |
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| * [http://www.mshri.on.ca/mitacs/seminars/SEMINARS.HTML Statistical methods for genomics at SLRI] * [http://www.fields.utoronto.ca/programs/scientific/CMM/06-07/ Centre for Mathematical Medicine seminars] |
|
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| = Toronto Bioinformatics Community = | A general [:FutureConferences:list of interesting upcoming conferences] is on the [:FutureConferences:Future Conferences] page. |
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| == People == | = Courses = |
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| ||Gary Bader||http://baderlab.org||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Biomolecular interaction networks and pathways|| ||Anthony Bonner||http://www.cs.toronto.edu/~bonner/||Computer Science||Computational biology algorithms, machine learning|| ||Michael Brudno|| ||Computer Science, Donnelly Centre for Cellular and Biomedical Research||Computational biology algorithms|| ||Hue-Sun Chan|| ||Biochemistry||Computational protein folding|| ||Andrew Emili|| ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Proteomics, functional genomics, bioinformatics, mass spectrometry|| ||Brendan Frey|| ||Electrical and Computer Engineering, Donnelly Centre for Cellular and Biomedical Research||Bayesian networks, machine learning|| ||Celia Greenwood|| ||Hospital for Sick Children|| || ||David Guttman|| ||Botany||Comparative and Evolutionary Genomics, Molecular Evolution|| ||Chris Hogue|| ||Biochemistry||Molecular interaction database, pathway simulation, protein folding|| ||Tim Hughes|| ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Functional genomics using gene expression microarrays|| ||Igor Jurisica|| ||Ontario Cancer Institute @ MaRS, Computer Science|| || ||David !McMillen|| ||, Mississauga|| ||Quaid Morris|| ||Donnelly Centre for Cellular and Biomedical Research, Computer Science|| || ||John Parkinson|| ||Hospital for Sick Children @ MaRS|| || ||Regis Pomes|| ||Hospital for Sick Children||Molecular dynamics simulations of proteins|| ||Nicholas Provart|| ||Botany||Arabidopsis thaliana|| || ||Steve Scherer|| ||Hospital for Sick Children @ MaRS, The Centre for Applied Genomics|| || ||Boris Steipe|| ||Biochemistry, Molecular and Medical Genetics||Structural Bioinformatics, Protein engineering|| || ||Elisabeth Tillier|| ||University Health Network @ MaRS|| || ||Thodoros Topaloglou|| ||Mechanical and Industrial Engineering|| || ||Mike Tyers|| ||Samuel Lunenfeld Research Institute|| || ||Shoshana Wodak|| ||Hospital for Sick Children|| || ||Zhaolei Zhang|| ||Donnelly Centre for Cellular and Biomedical Research, Banting and Best|| || |
The University of Toronto [:Courses:offers a number of courses and programs] in computational biology. Seneca College also offers a [http://bioinformatics.senecac.on.ca/ bioinformatics program]. The University of Waterloo [http://www.math.uwaterloo.ca/navigation/Prospective/programs/bioinfo.shtml undergraduate bioinformatics co-op program] and [http://monod.uwaterloo.ca/ bioinformatics research group]. = Toronto Computational Biology Community = == University of Toronto == ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Mainly computational||||||<style="background-color: #E0E0FF;"> || ||[http://baderlab.org Gary Bader]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best||Biomolecular interaction networks and pathways, molecular profiles, cancer|| ||[http://www.cs.toronto.edu/~bonner/ Anthony Bonner]||Computer Science||Computational biology algorithms, machine learning|| ||[http://www.cs.toronto.edu/~brudno/ Michael Brudno]||Computer Science, Donnelly Centre for Cellular and Biomedical Research||Computational biology algorithms|| ||[http://ashercutter.net/ Asher Cutter]||Ecology & Evolutionary Biology||Evolutionary genetics|| ||[http://biochemistry.utoronto.ca/chan/bch.html Hue-Sun Chan]||Biochemistry, Medical Genetics||Computational protein folding|| ||[http://www.psi.toronto.edu/ Brendan Frey]||Electrical and Computer Engineering, Donnelly Centre for Cellular and Biomedical Research||Bayesian networks, machine learning algorithms|| ||[http://www.cs.toronto.edu/~juris/ Igor Jurisica]||Ontario Cancer Institute @ MaRS, Computer Science||Cancer informatics|| ||[http://www.cs.toronto.edu/~lilien/ Ryan Lilien]||Donnelly Centre for Cellular and Biomedical Research, Computer Science, Banting and Best||Computational structural biology|| ||[http://web.chem-eng.utoronto.ca/index.php?option=com_content&task=view&id=650&Itemid=62 Radhakrishnan Mahadevan]||Chemical Engineering, IBBME||Systems analysis and engineering of biological processes, bacterial metabolic flux analysis|| ||[http://www.utm.utoronto.ca/~mcmillen/ David McMillen]||UofT, Mississauga||Quantitive biology, cell system simulation|| ||[http://www.psi.toronto.edu/~quaid/ Quaid Morris]||Donnelly Centre for Cellular and Biomedical Research, Computer Science||Machine learning algorithms|| ||[http://www.biochemistry.utoronto.ca/parkinson/lab/ John Parkinson]||Hospital for Sick Children @ MaRS, Medical Genetics||Comparitive genomics, cell system simulation|| ||[http://biochemistry.utoronto.ca/pomes/bch.html Regis Pomes]||Hospital for Sick Children||Molecular dynamics simulations of proteins|| ||[http://www.botany.utoronto.ca/ResearchLabs/ProvartLab Nicholas Provart]||Cell and Systems Biology||Arabidopsis thaliana gene expression analysis|| ||[http://biochemistry.utoronto.ca/steipe/ Boris Steipe]||Biochemistry, Medical Genetics||Structural bioinformatics, protein engineering|| ||[http://www.cs.toronto.edu/~roweis/ Sam Roweis]||Computer Science||Machine learning, Analysis of large datasets|| ||[http://www.uhnresearch.ca/labs/tillier/home.htm Elisabeth Tillier]||University Health Network @ MaRS||Molecular evolution|| ||[http://www.mie.utoronto.ca/staff/profiles/thodoros/ Thodoros Topaloglou]||Mechanical and Industrial Engineering||Data management|| ||[http://biochemistry.utoronto.ca/wodak/bch.html Shoshana Wodak]||Hospital for Sick Children, Medical Genetics||Transcription factor-DNA binding, protein docking and engineering|| ||[http://www.utoronto.ca/zhanglab/ Zhaolei Zhang]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Comarative genomics, evolution, regulatory element prediction|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Mainly wet lab||||||<style="background-color: #E0E0FF;"> || ||[http://www.utoronto.ca/andrewslab/ Brenda Andrews]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Genetic and physical interactions in yeast|| ||[http://www.utoronto.ca/boonelab/ Charlie Boone]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Genetic and physical interactions in yeast|| ||[http://lambda.med.utoronto.ca/Davidson/ Alan Davidson]||Biochemistry, Medical Genetics||Protein folding, protein interactions|| ||[http://www.ecf.utoronto.ca/~sdavies/ Stephen Davies]||Institute for Biomaterials and Biomedical Engineering||Genetic ciruits, DNA computing|| ||[http://www.botany.utoronto.ca/ResearchLabs/guttmanLab/ David Guttman]||Cell and Systems Biology||Comparative and evolutionary genomics, molecular evolution|| ||[http://www.utoronto.ca/emililab/ Andrew Emili]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Proteomics, functional genomics, bioinformatics, mass spectrometry|| ||[http://chemogenomics.med.utoronto.ca/ Guri Giaever]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Chemical genomics/genetics|| ||[http://www.utoronto.ca/medicalgenetics/PIs/GREENBLA.HTM Jack Greenblatt]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Proteomics, transcription regulation|| ||[http://biochemistry.utoronto.ca/houry/Labpage/index.html Walid Houry]||Biochemistry||Molecular chapersones|| ||[http://hugheslab.med.utoronto.ca/ Tim Hughes]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Functional genomics using gene expression microarrays|| ||[http://chemogenomics.med.utoronto.ca/ Corey Nislow]||Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics||Chemical genomics/genetics|| ||[http://pawsonlab.mshri.on.ca/ Tony Pawson]||Samuel Lunenfeld Research Institute, Medical Genetics||Cell signaling, protein interaction domains|| ||[http://xtal.oci.utoronto.ca/prive/index.html Gil Privé]||Ontario Cancer Institute||X-ray crystallography|| ||[http://www.tcag.ca/scherer/ Steve Scherer]||Hospital for Sick Children @ MaRS, The Centre for Applied Genomics, Medical Genetics||Human genetics|| ||[http://www.utoronto.ca/cancyto/ Jeremy Squire]||Princess Margaret Hospital||Microarrays and cancer|| ||[http://www.wlstanfordlab.com/ William Stanford]||Institute of Biomaterials and Biomedical Engineering||Mouse mutants, stem cells|| ||[http://individual.utoronto.ca/ktruong/ Kevin Truong]||Institute of Biomaterials and Biomedical Engineering, Electrical and Computer Engineering||Protein engineering, bioinformatics|| ||[http://www.mshri.on.ca/tyers/ Mike Tyers]||Samuel Lunenfeld Research Institute, Medical Genetics||Cell division in yeast, proteomics, interaction databases|| ||[http://kinase.uhnres.utoronto.ca/ Jim Woodgett]||Samuel Lunenfeld Research Institute, Medical Genetics||Protein kinases, DNA microarrays|| ||[http://www.mshri.on.ca/bios/Wrana.html Jeff Wrana]||Samuel Lunenfeld Research Institute, Medical Genetics||TGF-beta pathway, protein interaction networks|| ||[http://bigten.med.utoronto.ca Christopher Yip]||Institute of Biomaterials and Biomedical Engineering||Single molecule imaging, protein assembly|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Biostats and epidemiology||||||<style="background-color: #E0E0FF;"> || ||[http://142.150.180.17/faculty_template.asp?GetFile=BJoseph Joseph Beyene]||Hospital for Sick Children||Interest in gene expression microarray analysis|| ||[http://www.mshri.on.ca/?page=Dr.%20Laurent%20Briollais Laurent Briollais]||Samuel Lunenfeld Research Institute||Genetic interactions, graphical models|| ||[http://www.mshri.on.ca/mitacs/members/profiles.html Shelley Bull]||Samuel Lunenfeld Research Institute||Statistical genetics, microarray analysis|| ||[http://142.150.180.17/faculty_template.asp?GetFile=GCelia Celia Greenwood]||Hospital for Sick Children||Genetic epidemiology, microarray analysis|| ||[http://fisher.utstat.toronto.edu/~rafal/welcome.html Rafal Kustra]||Public Health Sciences||Mining large datasets, microarray analysis|| ||[http://www.mshri.on.ca/bios/Mclaughlin.html John McLaughlin]||Samuel Lunenfeld Research Institute||Statistical genetics and cancer|| ||[http://www.uhnres.utoronto.ca/researchers/profile.php?lookup=6094 David Tritchler]||Princess Margaret Hospital||Interest in gene expression microarray analysis|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Bioethics||||||<style="background-color: #E0E0FF;"> || ||[http://www.utoronto.ca/jcb/about/singer.htm Peter Singer]||Joint Centre for Bioethics||Genomics and global health|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Centres||||||<style="background-color: #E0E0FF;"> || ||[http://www.ccb.sickkids.ca/ Centre for Computational Biology]||Hospital for Sick Children||Support and services|| ||[http://www.phenogenomics.ca Toronto Centre for Phenogenomics]||SLRI, UHN, !SickKids, St. Michael's||Mouse phenogenomics|| ||[http://www.cmhd.ca/ Centre for Modeling Human Disease]||Centre for Phenogenomics||Gene trap database|| ||[http://www.ehealthinnovation.org/ Centre for Global eHealth Innovation]||University Health Network, University of Toronto||eHealth|| ||[http://www.ocbn.ca/ Ontario Cancer Biomarker Network]||MaRS||Cancer Biomarkers|| ||[http://www.crio.on.ca/ Cancer Research Institute of Ontario]||MaRS||Coming soon|| ||[http://www.fields.utoronto.ca/programs/scientific/CMM/ Centre for Mathematical Medicine]||Fields Institute||Medical Applications of Math|| == York University == ||[http://www.cs.yorku.ca/~datta/ Suprakash Datta]||Computer Science||Genomic signal processing|| ||[http://www.math.yorku.ca/~jgrigull/ Jörg Grigull]||Mathematics and Statistics||Microarray analysis|| ||[http://gl.yorku.ca:8008/GlMedia.nsf/DeptInformationTechnology/3FBEFA57B9F7327E85256A22006C0EF6?OpenDocument Mariana Kant]||Computer Science||Databases, algorithms|| ||[http://www.math.yorku.ca/Who/Faculty/Whiteley/menu.html Walter Whiteley]||Mathematics and Statistics||Protein structure|| |
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| ||See the [http://cbio.ca/ Computational Biology Institute of Ontario] [http://cbio.ca/community.html community website],[[BR]] organized by Boris Steipe, for an Ontario-wide list.||attachment:CBIO_Logo_Name.gif|| ||See the [http://bioinformatics.ca/ bioinformatics.ca] [http://bioinformatics.ca/bioinformatics_resources/people/ community website],[[BR]] organized by Francis Ouellette, for a Canada-wide list.||attachment:bioinfoca.jpg|| |
||See the [http://cbio.ca/ Computational Biology Institute of Ontario] [http://cbio.ca/community.html community website],[[BR]] organized by Boris Steipe, for an Ontario-wide list.||<style="text-align: center;">attachment:CBIO_Logo_Name.gif|| ||See the [http://bioinformatics.ca/ bioinformatics.ca] [http://bioinformatics.ca/bioinformatics_resources/people/ community website],[[BR]] organized by Francis Ouellette, for a Canada-wide list.||<style="text-align: center;">attachment:bioinfoca.jpg|| ||See the [http://www.gchelpdesk.ualberta.ca/ Canadian Bioinformatics Help Desk] for help with bioinformatics tools||attachment:helpdesk.jpg|| |
| Line 55: | Line 113: |
| ||||||||<(>'''Bioinformatics'''|| | ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Bioinformatics||||||<style="background-color: #E0E0FF;"> || |
| Line 57: | Line 115: |
| ||||||||<(>'''Chemiinformatics'''|| | ||Benetech||http://www.benetech.com/||180 Bloor St. W. Suite 500||Clinical software, LIMS|| ||cStar Technologies||http://www.cstartech.com/||1122 Finch Ave. W.||Wireless sample tracking|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Clinical informatics||||||<style="background-color: #E0E0FF;"> || ||!McDougall Scientific||http://www.mcd-sci.on.ca||789 Don Mills Rd. Suite 305||Clinical statistical analysis, data management|| ||Medical Databanks||http://www.medicaldatabanks.com/||880 Ellesmere Rd., 3rd Floor||Clinical research, data management|| ||!RamSoft||http://www.ramsoft.biz/||243 College Street, Suite 100||Medical imaging software|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Chemiinformatics||||||<style="background-color: #E0E0FF;"> || |
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| ||||||||<(>'''Biomedical graphics'''|| | ||!SimBioSys||http://www.simbiosys.ca/||135 Queen's Plate Drive Unit 520||Computational chemistry, docking|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Biomedical graphics||||||<style="background-color: #E0E0FF;"> || |
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| ||UofT Biomedical Communications program||http://www.bmc.med.utoronto.ca/BMC/||UofT MSB||M.Sc. program|| ||||||||<(>'''General'''|| |
||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Genomics||||||<style="background-color: #E0E0FF;"> || ||!ChondroGene||http://www.chondrogene.com/||800 Petrolia Road (401 & Keele)||Molecular diagnostics|| ||!CombiMatrix||http://www.combimatrix.com/||MaRS||Custom DNA microarrays|| ||Tm Bioscience||http://www.tmbioscience.com/||439 University Ave, Suite 900||DNA-based diagnostics|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Proteomics||||||<style="background-color: #E0E0FF;"> || ||MDS Sciex||http://www.mdssciex.com||71 Four Valley Drive, Concord, ON||Mass spectrometry instruments/software|| ||Infochromics||http://www.infochromics.com/||MaRS building||Proteomics data analysis software|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Pharmaceutical||||||<style="background-color: #E0E0FF;"> || ||Sanofi Pasteur||http://www.sanofipasteur.ca/sanofi-pasteur/front/index.jsp?siteCode=AVP_CA&lang=EN&codeRubrique=85||1755 Steeles Avenue West||Vaccine development|| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Biotech hubs||||||<style="background-color: #E0E0FF;"> || |
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= Toronto Restaurants = *only good ones + reviews |
This page focuses on the Toronto Computational Biology community.
Seminars
An up to date list of computational biology relevant seminars in Toronto is maintained at http://compbio.cs.toronto.edu/cbl/events.htm (in a Google Calendar).
Additional seminar lists:
[http://www.biochemistry.utoronto.ca/department/cette_semaine.html Cette Semaine]
[http://www.utoronto.ca/reg/notices_main.pl University of Toronto Web Notice System] maintains seminars for a few departments
[http://www.utoronto.ca/reg/list_notices.pl?dept=chem&time_frame=year Chemistry]
[http://www.utoronto.ca/reg/list_notices.pl?dept=csci&time_frame=year Computer Science]
[http://www.utoronto.ca/reg/list_notices.pl?dept=medicine&time_frame=year Medicine]
[http://www.utoronto.ca/reg/list_notices.pl?dept=stats&time_frame=year Statistics]
[http://www.utoronto.ca/reg/list_notices.pl?dept=botany&dept=csci&dept=ihpst&dept=maths&dept=medicine&dept=stats&dept=zoology&dept=chem&dept=cgcs&dept=kmdi&dept=medgen&dept=physics&time_frame=year multiple departments]
[http://www.mshri.on.ca/mitacs/seminars/SEMINARS.HTML Statistical methods for genomics at SLRI]
[http://www.fields.utoronto.ca/programs/scientific/CMM/06-07/ Centre for Mathematical Medicine seminars]
Conferences
A [:Conferences:list of conferences] that members of the Bader lab will attend or have attended is on the ["Conferences"] page.
A general [:FutureConferences:list of interesting upcoming conferences] is on the [:FutureConferences:Future Conferences] page.
Courses
The University of Toronto [:Courses:offers a number of courses and programs] in computational biology.
Seneca College also offers a [http://bioinformatics.senecac.on.ca/ bioinformatics program].
The University of Waterloo [http://www.math.uwaterloo.ca/navigation/Prospective/programs/bioinfo.shtml undergraduate bioinformatics co-op program] and [http://monod.uwaterloo.ca/ bioinformatics research group].
Toronto Computational Biology Community
University of Toronto
Mainly computational |
|
||
[http://baderlab.org Gary Bader] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best |
Biomolecular interaction networks and pathways, molecular profiles, cancer |
|
[http://www.cs.toronto.edu/~bonner/ Anthony Bonner] |
Computer Science |
Computational biology algorithms, machine learning |
|
[http://www.cs.toronto.edu/~brudno/ Michael Brudno] |
Computer Science, Donnelly Centre for Cellular and Biomedical Research |
Computational biology algorithms |
|
[http://ashercutter.net/ Asher Cutter] |
Ecology & Evolutionary Biology |
Evolutionary genetics |
|
[http://biochemistry.utoronto.ca/chan/bch.html Hue-Sun Chan] |
Biochemistry, Medical Genetics |
Computational protein folding |
|
[http://www.psi.toronto.edu/ Brendan Frey] |
Electrical and Computer Engineering, Donnelly Centre for Cellular and Biomedical Research |
Bayesian networks, machine learning algorithms |
|
[http://www.cs.toronto.edu/~juris/ Igor Jurisica] |
Ontario Cancer Institute @ MaRS, Computer Science |
Cancer informatics |
|
[http://www.cs.toronto.edu/~lilien/ Ryan Lilien] |
Donnelly Centre for Cellular and Biomedical Research, Computer Science, Banting and Best |
Computational structural biology |
|
[http://web.chem-eng.utoronto.ca/index.php?option=com_content&task=view&id=650&Itemid=62 Radhakrishnan Mahadevan] |
Chemical Engineering, IBBME |
Systems analysis and engineering of biological processes, bacterial metabolic flux analysis |
|
UofT, Mississauga |
Quantitive biology, cell system simulation |
||
[http://www.psi.toronto.edu/~quaid/ Quaid Morris] |
Donnelly Centre for Cellular and Biomedical Research, Computer Science |
Machine learning algorithms |
|
[http://www.biochemistry.utoronto.ca/parkinson/lab/ John Parkinson] |
Hospital for Sick Children @ MaRS, Medical Genetics |
Comparitive genomics, cell system simulation |
|
[http://biochemistry.utoronto.ca/pomes/bch.html Regis Pomes] |
Hospital for Sick Children |
Molecular dynamics simulations of proteins |
|
[http://www.botany.utoronto.ca/ResearchLabs/ProvartLab Nicholas Provart] |
Cell and Systems Biology |
Arabidopsis thaliana gene expression analysis |
|
[http://biochemistry.utoronto.ca/steipe/ Boris Steipe] |
Biochemistry, Medical Genetics |
Structural bioinformatics, protein engineering |
|
[http://www.cs.toronto.edu/~roweis/ Sam Roweis] |
Computer Science |
Machine learning, Analysis of large datasets |
|
[http://www.uhnresearch.ca/labs/tillier/home.htm Elisabeth Tillier] |
University Health Network @ MaRS |
Molecular evolution |
|
[http://www.mie.utoronto.ca/staff/profiles/thodoros/ Thodoros Topaloglou] |
Mechanical and Industrial Engineering |
Data management |
|
[http://biochemistry.utoronto.ca/wodak/bch.html Shoshana Wodak] |
Hospital for Sick Children, Medical Genetics |
Transcription factor-DNA binding, protein docking and engineering |
|
[http://www.utoronto.ca/zhanglab/ Zhaolei Zhang] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Comarative genomics, evolution, regulatory element prediction |
|
Mainly wet lab |
|
||
[http://www.utoronto.ca/andrewslab/ Brenda Andrews] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Genetic and physical interactions in yeast |
|
[http://www.utoronto.ca/boonelab/ Charlie Boone] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Genetic and physical interactions in yeast |
|
[http://lambda.med.utoronto.ca/Davidson/ Alan Davidson] |
Biochemistry, Medical Genetics |
Protein folding, protein interactions |
|
[http://www.ecf.utoronto.ca/~sdavies/ Stephen Davies] |
Institute for Biomaterials and Biomedical Engineering |
Genetic ciruits, DNA computing |
|
[http://www.botany.utoronto.ca/ResearchLabs/guttmanLab/ David Guttman] |
Cell and Systems Biology |
Comparative and evolutionary genomics, molecular evolution |
|
[http://www.utoronto.ca/emililab/ Andrew Emili] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Proteomics, functional genomics, bioinformatics, mass spectrometry |
|
[http://chemogenomics.med.utoronto.ca/ Guri Giaever] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Chemical genomics/genetics |
|
[http://www.utoronto.ca/medicalgenetics/PIs/GREENBLA.HTM Jack Greenblatt] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Proteomics, transcription regulation |
|
[http://biochemistry.utoronto.ca/houry/Labpage/index.html Walid Houry] |
Biochemistry |
Molecular chapersones |
|
[http://hugheslab.med.utoronto.ca/ Tim Hughes] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Functional genomics using gene expression microarrays |
|
[http://chemogenomics.med.utoronto.ca/ Corey Nislow] |
Donnelly Centre for Cellular and Biomedical Research, Banting and Best, Medical Genetics |
Chemical genomics/genetics |
|
[http://pawsonlab.mshri.on.ca/ Tony Pawson] |
Samuel Lunenfeld Research Institute, Medical Genetics |
Cell signaling, protein interaction domains |
|
[http://xtal.oci.utoronto.ca/prive/index.html Gil Privé] |
Ontario Cancer Institute |
X-ray crystallography |
|
[http://www.tcag.ca/scherer/ Steve Scherer] |
Hospital for Sick Children @ MaRS, The Centre for Applied Genomics, Medical Genetics |
Human genetics |
|
[http://www.utoronto.ca/cancyto/ Jeremy Squire] |
Princess Margaret Hospital |
Microarrays and cancer |
|
[http://www.wlstanfordlab.com/ William Stanford] |
Institute of Biomaterials and Biomedical Engineering |
Mouse mutants, stem cells |
|
[http://individual.utoronto.ca/ktruong/ Kevin Truong] |
Institute of Biomaterials and Biomedical Engineering, Electrical and Computer Engineering |
Protein engineering, bioinformatics |
|
[http://www.mshri.on.ca/tyers/ Mike Tyers] |
Samuel Lunenfeld Research Institute, Medical Genetics |
Cell division in yeast, proteomics, interaction databases |
|
[http://kinase.uhnres.utoronto.ca/ Jim Woodgett] |
Samuel Lunenfeld Research Institute, Medical Genetics |
Protein kinases, DNA microarrays |
|
[http://www.mshri.on.ca/bios/Wrana.html Jeff Wrana] |
Samuel Lunenfeld Research Institute, Medical Genetics |
TGF-beta pathway, protein interaction networks |
|
[http://bigten.med.utoronto.ca Christopher Yip] |
Institute of Biomaterials and Biomedical Engineering |
Single molecule imaging, protein assembly |
|
Biostats and epidemiology |
|
||
[http://142.150.180.17/faculty_template.asp?GetFile=BJoseph Joseph Beyene] |
Hospital for Sick Children |
Interest in gene expression microarray analysis |
|
[http://www.mshri.on.ca/?page=Dr.%20Laurent%20Briollais Laurent Briollais] |
Samuel Lunenfeld Research Institute |
Genetic interactions, graphical models |
|
[http://www.mshri.on.ca/mitacs/members/profiles.html Shelley Bull] |
Samuel Lunenfeld Research Institute |
Statistical genetics, microarray analysis |
|
[http://142.150.180.17/faculty_template.asp?GetFile=GCelia Celia Greenwood] |
Hospital for Sick Children |
Genetic epidemiology, microarray analysis |
|
[http://fisher.utstat.toronto.edu/~rafal/welcome.html Rafal Kustra] |
Public Health Sciences |
Mining large datasets, microarray analysis |
|
[http://www.mshri.on.ca/bios/Mclaughlin.html John McLaughlin] |
Samuel Lunenfeld Research Institute |
Statistical genetics and cancer |
|
[http://www.uhnres.utoronto.ca/researchers/profile.php?lookup=6094 David Tritchler] |
Princess Margaret Hospital |
Interest in gene expression microarray analysis |
|
Bioethics |
|
||
[http://www.utoronto.ca/jcb/about/singer.htm Peter Singer] |
Joint Centre for Bioethics |
Genomics and global health |
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Centres |
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[http://www.ccb.sickkids.ca/ Centre for Computational Biology] |
Hospital for Sick Children |
Support and services |
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[http://www.phenogenomics.ca Toronto Centre for Phenogenomics] |
SLRI, UHN, SickKids, St. Michael's |
Mouse phenogenomics |
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[http://www.cmhd.ca/ Centre for Modeling Human Disease] |
Centre for Phenogenomics |
Gene trap database |
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[http://www.ehealthinnovation.org/ Centre for Global eHealth Innovation] |
University Health Network, University of Toronto |
eHealth |
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[http://www.ocbn.ca/ Ontario Cancer Biomarker Network] |
MaRS |
Cancer Biomarkers |
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[http://www.crio.on.ca/ Cancer Research Institute of Ontario] |
MaRS |
Coming soon |
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[http://www.fields.utoronto.ca/programs/scientific/CMM/ Centre for Mathematical Medicine] |
Fields Institute |
Medical Applications of Math |
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York University
[http://www.cs.yorku.ca/~datta/ Suprakash Datta] |
Computer Science |
Genomic signal processing |
[http://www.math.yorku.ca/~jgrigull/ Jörg Grigull] |
Mathematics and Statistics |
Microarray analysis |
[http://gl.yorku.ca:8008/GlMedia.nsf/DeptInformationTechnology/3FBEFA57B9F7327E85256A22006C0EF6?OpenDocument Mariana Kant] |
Computer Science |
Databases, algorithms |
[http://www.math.yorku.ca/Who/Faculty/Whiteley/menu.html Walter Whiteley] |
Mathematics and Statistics |
Protein structure |
Sites
See the [http://cbio.ca/ Computational Biology Institute of Ontario] [http://cbio.ca/community.html community website],BR organized by Boris Steipe, for an Ontario-wide list. |
attachment:CBIO_Logo_Name.gif |
See the [http://bioinformatics.ca/ bioinformatics.ca] [http://bioinformatics.ca/bioinformatics_resources/people/ community website],BR organized by Francis Ouellette, for a Canada-wide list. |
attachment:bioinfoca.jpg |
See the [http://www.gchelpdesk.ualberta.ca/ Canadian Bioinformatics Help Desk] for help with bioinformatics tools |
attachment:helpdesk.jpg |
Companies
Bioinformatics |
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Unleashed Informatics |
http://unleashedinformatics.com/||200 Elm Street |
Bioinformatics databases e.g. BIND, SeqHound |
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Benetech |
http://www.benetech.com/||180 Bloor St. W. Suite 500 |
Clinical software, LIMS |
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cStar Technologies |
http://www.cstartech.com/||1122 Finch Ave. W. |
Wireless sample tracking |
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Clinical informatics |
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McDougall Scientific |
http://www.mcd-sci.on.ca||789 Don Mills Rd. Suite 305 |
Clinical statistical analysis, data management |
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Medical Databanks |
http://www.medicaldatabanks.com/||880 Ellesmere Rd., 3rd Floor |
Clinical research, data management |
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RamSoft |
http://www.ramsoft.biz/||243 College Street, Suite 100 |
Medical imaging software |
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Chemiinformatics |
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Advanced Chemistry Development |
https://www.acdlabs.com/||110 Yonge Street, 14th floor |
Chemistry software |
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SimBioSys |
http://www.simbiosys.ca/||135 Queen's Plate Drive Unit 520 |
Computational chemistry, docking |
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Biomedical graphics |
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AXS Biomedical Animation Studio |
http://axs3d.com/||MaRS building |
Biomedical 3D animation |
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Genomics |
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ChondroGene |
http://www.chondrogene.com/||800 Petrolia Road (401 & Keele) |
Molecular diagnostics |
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CombiMatrix |
http://www.combimatrix.com/||MaRS||Custom DNA microarrays |
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Tm Bioscience |
http://www.tmbioscience.com/||439 University Ave, Suite 900 |
DNA-based diagnostics |
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Proteomics |
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MDS Sciex |
http://www.mdssciex.com||71 Four Valley Drive, Concord, ON |
Mass spectrometry instruments/software |
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Infochromics |
http://www.infochromics.com/||MaRS building |
Proteomics data analysis software |
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Pharmaceutical |
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Sanofi Pasteur |
http://www.sanofipasteur.ca/sanofi-pasteur/front/index.jsp?siteCode=AVP_CA&lang=EN&codeRubrique=85||1755 Steeles Avenue West |
Vaccine development |
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Biotech hubs |
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MaRS Discovery District (Medical and Related Services) |
http://www.marsdd.com/||MaRS building |
Biotechnology hub |
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