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| 1. Banting and Best Department of Medical Research, University of Toronto, 112 College Street, Toronto, Ontario, Canada, M5G 1L6 1. Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, Ontario, Canada, M5S 3E1 1. Department of Physiology, University of Toronto 1 King's College Circle, Toronto, ON Canada M5S 1A8 |
1. Banting and Best Department of Medical Research, University of Toronto, 112 College Street, Toronto, Ontario, Canada, M5G 1L6 1. Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, Ontario, Canada, M5S 3E1 1. Department of Physiology, University of Toronto 1 King's College Circle, Toronto, ON Canada M5S 1A8 |
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| == GSEA Results == | |
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| Describe Data/R9cEM here. | 1. 8w R9C vs WT * Genesets up-regulated in R9C at 8W/early-stage disease - [[attachment:gsea_results_upinR9C_8w.xls]] * Genesets down-regulated in R9C at 8W/early-stage disease (down-regulated in R9C) - [[attachment:gsea_results_downinR9C_8w.xls]] 1. 16w R9C vs WT * Genesets up-regulated in R9C at 16W/mid-stage disease - [[attachment:gsea_results_upinR9C_16w.xls]] * Genesets down-regulated in R9C at 16W/mid-stage disease - [[attachment:gsea_results_downinR9C_16w.xls]] == Enrichment Map Cytoscape session File == 1. Cytoscape session of Enrichment map created with the above GSEA results files using p-value < 0.01 and fdr < 0.1 threshold. * [[attachment:R9C_EM_session.cys]] |
Pathway Analysis of Dilated Cardiomyopathy using Global Proteomic Profiling and Enrichment Maps
This data is supplementary material for:
Pathway Analysis of Dilated Cardiomyopathy using Global Proteomic Profiling and Enrichment Maps
Ruth Isserlin 1,2, Daniele Merico 1,2, Rasoul Alikhani-Koupaei 3, Anthony Gramolini 3, Gary D. Bader 1,2*, and Andrew Emili 1,2,*
- Banting and Best Department of Medical Research, University of Toronto, 112 College Street, Toronto, Ontario, Canada, M5G 1L6
- Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, Ontario, Canada, M5S 3E1
- Department of Physiology, University of Toronto 1 King's College Circle, Toronto, ON Canada M5S 1A8
GSEA Results
- 8w R9C vs WT
Genesets up-regulated in R9C at 8W/early-stage disease - gsea_results_upinR9C_8w.xls
Genesets down-regulated in R9C at 8W/early-stage disease (down-regulated in R9C) - gsea_results_downinR9C_8w.xls
- 16w R9C vs WT
Genesets up-regulated in R9C at 16W/mid-stage disease - gsea_results_upinR9C_16w.xls
Genesets down-regulated in R9C at 16W/mid-stage disease - gsea_results_downinR9C_16w.xls
Enrichment Map Cytoscape session File
Cytoscape session of Enrichment map created with the above GSEA results files using p-value < 0.01 and fdr < 0.1 threshold.