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| ||<style="text-align: center;"> ||Iain Wallace||Co-supervised with [http://chemogenomics.med.utoronto.ca/ Guri Giaever and Corey Nislow]||Oct.2007||Chemical genomics in yeast|| | ||<style="text-align: center;"> ||[:IainWallace:Iain Wallace]||Co-supervised with [http://chemogenomics.med.utoronto.ca/ Guri Giaever and Corey Nislow]||Oct.2007||Chemical genomics in yeast|| ||<style="text-align: center;">attachment:david.jpg||[:DavidGfeller:David Gfeller]|| ||Feb.2008||Specificity and robustness in protein interaction networks|| |
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| ||<style="text-align: center;">attachment:DanieleM.jpg ||Daniele Merico||[http://www.sbb.unimi.it/ Università di Milano] & [http://bimib.disco.unimib.it/ Università di Milano-Bicocca], Italy, visiting student||Nov.2007||Active cell map|| | ||<style="text-align: center;">attachment:DanieleM.jpg ||[:DanieleMerico:Daniele Merico]||[http://www.sbb.unimi.it/ Università di Milano] & [http://bimib.disco.unimib.it/ Università di Milano-Bicocca], Italy, visiting student||Nov.2007||Active cell map|| |
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| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Lab Technicians||||||||<style="background-color: #E0E0FF;"> || ||<style="text-align: center;"> ||Lianet Lopez||Technician (co-supervised with [http://www.utoronto.ca/boonelab/ Charlie Boone])||Oct.2007||Protein interaction screening|| |
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| ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Lab Technicians||||||||<style="background-color: #E0E0FF;"> || ||<style="text-align: center;">attachment:lianet.jpg||Lianet Lopez||Technician (co-supervised with [http://www.utoronto.ca/boonelab/ Charlie Boone])||Oct.2007-Jun.2008||Protein interaction screening|| |
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| ||<style="text-align: center;">attachment:ben.jpg||[:BenElliott:Benjamin Elliott]||University of Toronto Electrical Engineering||May-August.2008||Yeast systems analysis|| | |
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| ||<style="text-align: center;">attachment:aseel2.png||Aseel Al Dallal||University of Waterloo Co-op Bioinformatics (co-supervised with [http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html Steve Gallinger])||Jan-Apr.2007||Colorectal Cancer biomarkers|| | |
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| ||<style="text-align: center;">attachment:aseel2.png||Aseel Al Dallal||University of Waterloo Co-op Bioinformatics (co-supervised with [http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html Steve Gallinger])||Jan-Apr.2007||Colorectal Cancer biomarkers|| | ||<style="background-color: #E0E0FF; font-weight: bold; text-align: center;">Project Students||||||||<style="background-color: #E0E0FF;"> || ||||Monica Raj||University of British Columbia||July.2007-April.2008||Predicting in vivo PDZ domain protein interactions (4th year research project)|| ||||Maital Ashkenazi||Hebrew University, Jerusalem||Summer 2007||Enhanced search feature for Cytoscape (Google Summer of Code with David States and Allan Kuchinsky)|| ||||Anna Rukosuyeva||University of Toronto, Computer Science||Sep.2007-Dec.2008||Viewing compound nodes in Cytoscape (4th year project course)|| ||||Victoria Mui||University of Toronto, Computer Science||Summer 2008||Label layout algorithm for Cytoscape (Google Summer of Code with Greg Wilson)|| |
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| ||Adrian Verster||Molecular Genetics||Sept.2008||Predicting trigenic synthetic lethalic in yeast|| ||Harshika Seepany||Medical Genetics||Oct.2007||PDZ protein interaction specificity analysis|| |
Current Members
Bader Lab |
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attachment:gary.png |
[:GaryBader:Gary Bader] |
Assistant Professor |
Apr.2006 |
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Post docs |
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[:IainWallace:Iain Wallace] |
Co-supervised with [http://chemogenomics.med.utoronto.ca/ Guri Giaever and Corey Nislow] |
Oct.2007 |
Chemical genomics in yeast |
attachment:david.jpg |
[:DavidGfeller:David Gfeller] |
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Feb.2008 |
Specificity and robustness in protein interaction networks |
Graduate Students |
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attachment:anastasija.jpg |
[:AnastasijaBaryshnikova:Anastasija Baryshnikova] |
Medical Genetics (co-supervised with [http://www.utoronto.ca/boonelab/ Charlie Boone]) |
May.2006 |
Genetic interactions in yeast |
attachment:Shirley.jpg |
[:ShirleyHui:Shirley Hui] |
Medical Genetics |
May.2007 |
Domain specificity |
attachment:DanieleM.jpg |
[:DanieleMerico:Daniele Merico] |
[http://www.sbb.unimi.it/ Università di Milano] & [http://bimib.disco.unimib.it/ Università di Milano-Bicocca], Italy, visiting student |
Nov.2007 |
Active cell map |
attachment:vuk.png |
[:VukPavlovic:Vuk Pavlovic] |
Medical Genetics |
May.2007 |
Protein complex detection from networks |
attachment:chris.jpg |
[:ChrisTan:Chris Tan] |
Medical Genetics (co-supervised with [http://pawsonlab.mshri.on.ca/ Tony Pawson]) |
Jan.2007 |
Network evolution |
Software Engineers |
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attachment:moyez.png |
[:MoyezDharsee:Moyez Dharsee] |
Senior Bioinformatics Research Programmer |
Jan.2007 |
Protein interaction prediction |
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[:LaetitiaMorrison:Laetitia Morrison] |
Bioinformatics Research Programmer |
Sep.2007 |
Integrative Biology of Yeast |
|
[:RuthIsserlin:Ruth Isserlin] |
Bioinformatics Research Programmer (co-supervised with Andrew Emili) |
Nov.2007 |
Active cell map |
[:/Photos:More Photos] |
Past Members
Software Engineers |
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attachment:matan.png |
Michael Matan |
Senior Bioinformatics Research Programmer |
Jan-Aug.2007 |
Integrative Biology of Yeast |
Lab Technicians |
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attachment:lianet.jpg |
Lianet Lopez |
Technician (co-supervised with [http://www.utoronto.ca/boonelab/ Charlie Boone]) |
Oct.2007-Jun.2008 |
Protein interaction screening |
Undergraduate Students |
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|||
attachment:ben.jpg |
[:BenElliott:Benjamin Elliott] |
University of Toronto Electrical Engineering |
May-August.2008 |
Yeast systems analysis |
attachment:ioana.jpg |
[:IoanaIvan:Ioana Ivan] |
University of Toronto Computational Biology 299Y student (co-supervised with [http://biochemistry.utoronto.ca/reithmeier/bch.html Reinhart Reithmeier]) |
Sep.2006-Aug.2007 |
Membrane interactions with PDZ domains |
attachment:kevin.jpg |
[:KevinHa:Kevin Ha] |
University of Waterloo Co-op Bioinformatics (co-supervised with [http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html Steve Gallinger]) |
Sep-Dec.2006,BRApr-Aug.2007 |
Colorectal Cancer biomarkers |
attachment:stacy.png |
[:StacyHung:Stacy Hung] |
Bioinformatics, UWaterloo |
Apr-Aug.2007 |
Protein interaction prediction |
attachment:natalie.png |
Natalie Yeung |
University of Toronto Immunology, 4th year |
Jan-July.2007 |
Cytoscape usability |
attachment:aseel2.png |
Aseel Al Dallal |
University of Waterloo Co-op Bioinformatics (co-supervised with [http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html Steve Gallinger]) |
Jan-Apr.2007 |
Colorectal Cancer biomarkers |
attachment:faisal.gif |
Faisal Naqib |
University of Waterloo Faculty of Math(co-supervised with [http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html Steve Gallinger]) |
May-Aug.2006 |
Colorectal Cancer biomarkers |
Project Students |
|
|||
Monica Raj |
University of British Columbia |
July.2007-April.2008 |
Predicting in vivo PDZ domain protein interactions (4th year research project) |
|
Maital Ashkenazi |
Hebrew University, Jerusalem |
Summer 2007 |
Enhanced search feature for Cytoscape (Google Summer of Code with David States and Allan Kuchinsky) |
|
Anna Rukosuyeva |
University of Toronto, Computer Science |
Sep.2007-Dec.2008 |
Viewing compound nodes in Cytoscape (4th year project course) |
|
Victoria Mui |
University of Toronto, Computer Science |
Summer 2008 |
Label layout algorithm for Cytoscape (Google Summer of Code with Greg Wilson) |
|
Graduate Rotation Students |
|
||
Adrian Verster |
Molecular Genetics |
Sept.2008 |
Predicting trigenic synthetic lethalic in yeast |
Harshika Seepany |
Medical Genetics |
Oct.2007 |
PDZ protein interaction specificity analysis |
Shirley Hui |
Medical Genetics |
Mar.2007 |
Gene expression correlation analysis |
Vuk Pavlovic |
Medical Genetics |
Feb.2007 |
Protein complex detection |
Trevis Alleyne |
Medical Genetics |
Nov.2006 |
Protein interactions involving SH3 domains - specificity prediction |
Graham Cromar |
Medical Genetics |
Oct.2006 |
Protein interactions involving SH3 domains - interaction prediction |
Chris Tan |
Medical Genetics |
Sep.2006 |
Protein interactions involving SH3 domains - specificity analysis |