OICR Cancer Stem Cell Program

Experimental Design and Statistical Analysis

ChangJiang Xu, Gary Bader

OICR CSC Projects (PI's name and/or project title listed below)
Biostatistics service

-  ⇤ ← Revision 29 as of 2014-08-14 18:50:31 → 
  Size: 997
  Editor: ChangjiangXu
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+   ← Revision 55 as of 2015-02-12 15:36:39 → ⇥
  Size: 2451
  Editor: ChangjiangXu
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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-= OICR CSC Statistical Analysis Service =
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-== OICR Cancer Stem Cell program ==
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-Changjiang Xu, Gary Bader
+= OICR Cancer Stem Cell Program =

== Experimental Design and Statistical Analysis ==

[[ChangjiangXu |ChangJiang Xu]], [[GaryBader | Gary Bader]]
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- * [[ChangjiangXu/Intranet/Weekly | Weekly Updates]]
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- * OICR CSC Projects (PI and/or title listed below)
   * [[CancerStemCellProject/ChangjiangXu/LA02 | Laurie Ailles, Crosstalk between CAFs and ovarian cancer cells ]]
   * [[CancerStemCellProject/ChangjiangXu/PD03 | Peter Dirks, Role of dopamine D4 receptor in glioblastoma stem cells]]
+ * OICR CSC Projects (PI's name and/or project title listed below) 
   * Laurie Ailles
     * [[CancerStemCellProject/ChangjiangXu/LA02 | LA02 (LA02_CAF_ovarian_Laurie): Crosstalk between CAFs and ovarian cancer cells]]
       1. [[CancerStemCellProject/ChangjiangXu/LA02#Differential_Expression_Analysis | Differential expression analysis]]
       1. [[CancerStemCellProject/ChangjiangXu/LA02#TCGA_OV_Data_Analysis | TCGA OV data analysis]]
   * Peter Dirks
     * [[CancerStemCellProject/ChangjiangXu/PD03 | PD03: Role of dopamine D4 receptor in glioblastoma stem cells]]
       1. [[CancerStemCellProject/ChangjiangXu/PD03#PD03-part2:_Normal_Cells | Part2: normal cells]]
       1. [[CancerStemCellProject/ChangjiangXu/PD03#PD03-part3:_TCGA_Glioblastoma_Data_Analysis | Part3: TCGA GBM data analysis]]
       1. [[CancerStemCellProject/ChangjiangXu/PD03#Comparison_of_TCGA_GBM_Affymetrix_and_RNAseq_Data | Comparison of TCGA GBM Affymetrix and RNAseq data]]
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-   * [[CancerStemCellProject/ChangjiangXu/HALT02 | HALT02_part2/JAK2]]
   * [[CancerStemCellProject/ChangjiangXu/KH01 | Kristin Hope]]
   * [[CancerStemCellProject/ChangjiangXu/BP03 | Bret Pearson]]

 * [[CSCBiostatService | Biostatistics Service]]
+   * HALT02/JAK2
     * [[CancerStemCellProject/ChangjiangXu/HALT02_SRC | Differential expression analysis of SRC high vs low (negative) sub-populations]]
     * [[CancerStemCellProject/ChangjiangXu/HALT02_JAK2 | Comparison of the pathways for XG-R/PF-R, XG-NR/PF-NR, and XG-R/PF-NR]]
   * Bret Pearson
     * [[CancerStemCellProject/ChangjiangXu/BP03 | BP03: Spatial Organization of the planarian transcriptome]]
     * [[CancerStemCellProject/ChangjiangXu/BP04 | BP04: Mechanisms driving asymmetric cell fate outcomes in planarian adult stem cell lineages]]
 
 * [[CSCBiostatService | Biostatistics service]]
   1. [[CSCBiostatService/AffymetrixDataAnalysis | Affymetrix microarray data analysis]]
   1. [[CSCBiostatService/IlluminaChipDataAnalysis | Illumina’s BeadChip microarray data analysis]]
   1. [[CSCBiostatService/RNAseqDataAnalysis | RNA-seq data analysis]]
   1. [[CSCBiostatService/flowCytometryDataAnalysis | Flow cytometry data analysis]]
   1. [[CSCBiostatService/survivalAnalysis | Survival analysis]]