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| == PhD Thesis == [[attachment:PhD_Thesis_DanieleMerico_Final_MainBody.pdf]] == Enrichment Map BioPathways Presentation == |
== Current == === PhD Thesis === * [[attachment:PhD_Thesis_DanieleMerico_Final_MainBody.pdf]] === Novartis === * [[attachment:Novartis.RData|Novartis RData]] == Old == === Gene Lists === * [[attachment:Autism_Genes_DiseaseHub.txt|Autism from Disease Hub]] === Gene-set Collections === * [[attachment:Hs_GO_KEGG_NCI.GMT|Gene Ontology, KEGG, NCI, PFAM]] === GSEA/EM Test Data === * '''MCF7 Estrogen Treatment''' * [[attachment:MCF7_ExprMx_v2.txt|Gene Expression Table (txt)]] * [[attachment:MCF7_Estrogen_Pheno.CLS|GSEA Phenotype File (CLS)]] * [[attachment:MCF7_GSEA_Full.zip|Full GSEA results]] === WikiPathways === * [[attachment:Hs_contributed.zip|Human collection]] === OBI === * [[attachment:assignment_gse4600.docx|Yi Yan]] === Other Data === * TNotch * [[attachment:TNotch_GeneLogisticFit_R_DM.zip|Logistic Fit for gene scoring]] === Enrichment Map BioPathways Presentation === |
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| == Python NumPy Library == | === Python NumPy Library === |
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| == Reactome Mouse Pathway data set (Dec 5, 2008) == | === Reactome Mouse Pathway data set (Dec 5, 2008) === |
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| == Utility Folder == | === Utility Folder === |
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| == Debugging EM == === Expression Matrix Display Bug === |
=== Debugging EM === ==== Expression Matrix Display Bug ==== |
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| === Post-Analysis Bug === | ==== Post-Analysis Bug ==== |
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| == Gene Lists == * [[attachment:Autism_Genes_DiseaseHub.txt|Autism from Disease Hub]] == Gene-set Collections == * [[|Gene Ontology, KEGG, NCI, PFAM]] |
Temporary Uploads
Current
PhD Thesis
Novartis
Old
Gene Lists
Gene-set Collections
GSEA/EM Test Data
MCF7 Estrogen Treatment
WikiPathways
OBI
Other Data
Enrichment Map BioPathways Presentation
ISMB09_DanieleMerico_EnrichmentMaps_06_def.ppt
Python NumPy Library
numpy-1.3.0-win32-superpack-python2.5.exe
Reactome Mouse Pathway data set (Dec 5, 2008)
Utility Folder
Debugging EM
Expression Matrix Display Bug
Post-Analysis Bug