Daniele Merico

Contact

Location: Common Lab Area, 6th Floor (CCBR)
Email: <daniele DOT merico AT gmail DOT com>
Skype: the-amerigo
Linked-In: Daniele Merico

Project Directory (Private)

• Mouse Heart Disease Model Project (Transcriptomics, Proteomics, miRNA, Pathways)

• Enrichment Map: Network Visualization of Enrichment Results

• Visualization of BioPAX encoded Pathways

• Functional Enrichment and Pathway Analysis in human genetics

  • De-novo CNV in Autism: Pathway Analysis

  • Neuropsychological Disorders Meta-Analysis

Past Collaborations

• Clinical Phenotype Ontology

  • Gianluca Colombo (UNIMIB - DISCo, Milano, Italy)

• Functional Landscape of RET Receptor Transcriptional Program

  • Marco Antoniotti (UNIMIB - DISCo, Milano, Italy)
  • Maria Grazia Borrello (Istituto Tumori - Milano, Italy)
  • Gariboldi Manuela (Istituto Tumori / IFOM/IEO - Milano, Italy)

• Functional Landscape of p63 Transcription Factor Targets

  • Roberto Mantovani (UNIMI - DSBB, Milano, Italy)
  • Alessandro Terrinoni (Universita La Sapienza, Roma, Italy)

R Code Directory (Public)

Microarray Data Analysis

• Affymetrix Microarray Data Processing

• Hierarchical Clustering using Pearson Correlaton

Gene-set Enrichment Analysis

• Generate gene set collections from Bioconductor libraries

• Reads a GMT file into a R list object, or binary matrix

ID Conversion

• Entrez-Gene ID and Symbols

Educational Material

• CCBR course on Microarray Data Analysis

• OBI course on Pathway Analysis

CV and Publications

• Complete CV (includes Publications)

Trivia & Amenities

• How not to build an ontology: The Celestial Emporium of Benevolent Knowledge's Taxonomy

• Si Hoc Legere Scis Nimium Eruditionis Habes
• Datta. Dayadhvam. Damyata. Shantih shantih shantih.

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