Size: 4907
Comment:
|
Size: 5323
Comment:
|
Deletions are marked like this. | Additions are marked like this. |
Line 7: | Line 7: |
* Predict specificity of peptide recognition domain from the primary amino acid sequence. | * Computationally predict specificity of peptide recognition domain from the primary amino acid sequences |
Line 10: | Line 10: |
== Background == * [wiki:/PDZ PDZ Domains] * [wiki:/MachineLearning Machine Learning] |
|
Line 11: | Line 15: |
## [wiki:/Strategy Strategy Log] | * [wiki:/Strategy Strategy] == Ideas == * [wiki:/Ideas Ideas] == Data == * [wiki:/PDZData PDZ Data] == Experiments == * [wiki:/Experiments Experiments and Results] |
Line 14: | Line 27: |
* [wiki:/Log Status Log] | * [wiki:/Log Status] |
Line 69: | Line 82: |
== Tools/Resources == * [wiki:/ToolsResources Tools and Resources] == Reading Notes == * [wiki:/ShirleyHui/MBCReadings Molecular Biology of the Cell] * [wiki:/ShirleyHui/MBCReadings Protein-protein Interaction Detection] * Support Vector Machines == Related Literature == * [http://www.connotea.org/rss/user/s2hui?download=view Literature List on Connotea] * [http://www.baderlab.org/DomainSpecificityPredictionProject/Reading Molecular Biology of the Cell] |
|
Line 73: | Line 98: |
== Tools/Resources == * [wiki:/ToolsResources Tools and Resources] == Related Literature == * [http://www.connotea.org/rss/user/s2hui?download=view Literature List on Connotea] === Textbook === * [http://www.baderlab.org/DomainSpecificityPredictionProject/Reading Molecular Biology of the Cell] |
Table of Contents
Goals
- Computationally predict specificity of peptide recognition domain from the primary amino acid sequences
- Analyze PDZ, WW and then SH3 domains
Background
- [wiki:/PDZ PDZ Domains]
[wiki:/MachineLearning Machine Learning]
Strategy
- [wiki:/Strategy Strategy]
Ideas
- [wiki:/Ideas Ideas]
Data
- [wiki:/PDZData PDZ Data]
Experiments
- [wiki:/Experiments Experiments and Results]
Status
- [wiki:/Log Status]
Tools/Resources
[wiki:/ToolsResources Tools and Resources]
Reading Notes
- [wiki:/ShirleyHui/MBCReadings Molecular Biology of the Cell]
- [wiki:/ShirleyHui/MBCReadings Protein-protein Interaction Detection]
- Support Vector Machines
Related Literature
[http://www.connotea.org/rss/user/s2hui?download=view Literature List on Connotea]
[http://www.baderlab.org/DomainSpecificityPredictionProject/Reading Molecular Biology of the Cell]
Team
- Shirley Hui
- Gary Bader