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| * Predict specificity of peptide recognition domain from the primary amino acid sequence. | * Computationally predict specificity of peptide recognition domain from the primary amino acid sequences |
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| * [wiki:/PDZ Domains PDZDomain] | * [wiki:/PDZ PDZ Domains] * [wiki:/MachineLearning Machine Learning] |
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| == Ideas == * [wiki:/Ideas Ideas] == Data == * [wiki:/PDZData PDZ Data] == Experiments == * [wiki:/Experiments Experiments and Results] |
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| * [wiki:/Log Status Log] | * [wiki:/Log Status] |
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| == Reading Notes == * [wiki:/ShirleyHui/MBCReadings Molecular Biology of the Cell] * [wiki:/ShirleyHui/MBCReadings Protein-protein Interaction Detection] * Support Vector Machines |
Table of Contents
Goals
- Computationally predict specificity of peptide recognition domain from the primary amino acid sequences
- Analyze PDZ, WW and then SH3 domains
Background
- [wiki:/PDZ PDZ Domains]
[wiki:/MachineLearning Machine Learning]
Strategy
- [wiki:/Strategy Strategy]
Ideas
- [wiki:/Ideas Ideas]
Data
- [wiki:/PDZData PDZ Data]
Experiments
- [wiki:/Experiments Experiments and Results]
Status
- [wiki:/Log Status]
Tools/Resources
[wiki:/ToolsResources Tools and Resources]
Reading Notes
- [wiki:/ShirleyHui/MBCReadings Molecular Biology of the Cell]
- [wiki:/ShirleyHui/MBCReadings Protein-protein Interaction Detection]
- Support Vector Machines
Related Literature
[http://www.connotea.org/rss/user/s2hui?download=view Literature List on Connotea]
[http://www.baderlab.org/DomainSpecificityPredictionProject/Reading Molecular Biology of the Cell]
Team
- Shirley Hui
- Gary Bader