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| Current Projects: | [[RuthIsserlin/Intranet/Weekly|Weekly Updates - 2015- 2020]] [[RuthIsserlin/Intranet/Weekly_part2|Weekly Updates - 2021 - September 2026]] [[RuthIsserlin/Intranet/Weekly_part3|Weekly Updates - October 2026 - ]] Current Projects: 1. [[CellCellInteractions| Cell - Cell Interactions or Receptor - Ligand Interactions]] 1. [[UpToDateGeneSets| Automatically updated Gene sets]] 1. [[Software/EnrichmentMap|Enrichment Map]] 1. [[PathwayAnalysis| Pathway Analysis ]] Current Analyses: 1. [[RuthIsserlin/CancerStemCellProject/LA03|LA03/LA02 - defining ligand/receptor networks]] Old Projects: 1. [[GSEAEnrichmentMapIntegration | Modularizing and Porting EM to Cytoscape 3.0 and integrating it with GSEA]] 1. [[GSoC2014_SocialNetworkApp | Google summer of code 2014 Co-Authorship Social Network App for Cytoscape 3.0 Idea]] |
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| 1. [[Software/EnrichmentMap|Enrichment Map]] | |
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| 1. [[UpToDateGeneSets| Automatically updated Gene sets]] | |
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| 1. [[GSEAEnrichmentMapIntegration | Modularizing and Porting EM to Cytoscape 3.0 and integrating it with GSEA]] | |
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| 1. [[GSoC2014_SocialNetworkApp | Google summer of code 2014 Co-Authorship Social Network App for Cytoscape 3.0 Idea]] | |
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| [[Data/BINDTranslation]] | Data: * [[Data/BINDTranslation]] * [[Data/R9cEM]] * [[Data/RoadsNotTaken]] * [[Data/ProteomicsEM]] |
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| [[Data/R9cEM]] | |
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| [[Data/RoadsNotTaken]] [[Data/ProteomicsEM]] MericoVisitMay2007 CategoryHomepage HumanChromatinProjectGroup InstallingCytoscape32OnMacOSXSnowLeopard |
Misc: * HumanChromatinProjectGroup * [[InstallingCytoscape32OnMacOSXSnowLeopard]] * CytoscapeWorkshopMay2016 |
Ruth Isserlin
Email: <ruth DOT isserlin AT utoronto DOT ca>
Weekly Updates - 2021 - September 2026
Weekly Updates - October 2026 -
Current Projects:
Current Analyses:
Old Projects:
Modularizing and Porting EM to Cytoscape 3.0 and integrating it with GSEA
Google summer of code 2014 Co-Authorship Social Network App for Cytoscape 3.0 Idea
GeneSets (old)
modified psicquic cytoscape plugin to compute pairwise interactions
Google summer of code 2013 Copublication App for Cytoscape 3.0 Idea
What do we publish? - publication trends analyzed querying different sets of genes.
Fun:
Data:
Misc: