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| ||<#e0e0ff style="font-weight: bold; text-align: center;">Bader Lab ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> {{attachment:gary.png}} ||[[GaryBader|Gary Bader]] ||Assistant Professor ||Apr.2006 || || ||<#e0e0ff style="font-weight: bold; text-align: center;">Post docs ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> ||[[IainWallace|Iain Wallace]] ||Co-supervised with [[http://chemogenomics.med.utoronto.ca/|Guri Giaever and Corey Nislow]] ||Oct.2007 ||Chemical genomics in yeast || ||<style="text-align: center;"> {{attachment:david.jpg}} ||[[DavidGfeller|David Gfeller]] || ||Feb.2008 ||Specificity and robustness in protein interaction networks || ||<style="text-align: center;"> {{attachment:oliver.jpg}} ||[[OliverStueker|Oliver Stueker]] || ||Dec.2008 ||Cancer Stem Cells / Active cell map || ||<style="text-align: center;"> {{attachment:magali.png}} ||[[MagaliMichaut|Magali Michaut]] || ||Jan.2009 || Multiple perturbations in yeast || ||<#e0e0ff style="font-weight: bold; text-align: center;">Graduate Students ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> ||[[RonAmmar|Ron Ammar]] ||Co-supervised by Corey Nislow and Guri Giaever in the [[http://chemogenomics.med.utoronto.ca/|HIPHOP Lab]] ||Jan.2009 ||Yeast chemical genomics and drug target identification|| ||<style="text-align: center;"> {{attachment:anastasija.jpg}} ||[[AnastasijaBaryshnikova|Anastasija Baryshnikova]] ||Molecular Genetics (co-supervised with [[http://www.utoronto.ca/boonelab/|Charlie Boone]]) ||May.2006 ||Genetic interactions in yeast || ||<style="text-align: center;"> {{attachment:Shirley.jpg}} ||[[ShirleyHui|Shirley Hui]] ||Molecular Genetics ||May.2007 ||Domain specificity || ||<style="text-align: center;"> ||[[ShobhitJain|Shobhit Jain]] ||Computer Science ||Sep.2008 ||Domain interaction prediction || ||<style="text-align: center;"> {{attachment:DanieleM.jpg}} ||[[DanieleMerico|Daniele Merico]] ||[[http://www.sbb.unimi.it/|Università di Milano]] & [[http://bimib.disco.unimib.it/|Università di Milano-Bicocca]], Italy, visiting student ||Nov.2007 ||Active cell map || ||<style="text-align: center;"> {{attachment:vuk.png}} ||[[VukPavlovic|Vuk Pavlovic]] ||Molecular Genetics ||May.2007 ||Protein complex detection from networks || ||<style="text-align: center;"> {{attachment:chris.jpg}} ||[[ChrisTan|Chris Tan]] ||Molecular Genetics (co-supervised with [[http://pawsonlab.mshri.on.ca/|Tony Pawson]]) ||Jan.2007 ||Network evolution || ||<#e0e0ff style="font-weight: bold; text-align: center;">Software Engineers ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> {{attachment:moyez.png}} ||[[MoyezDharsee|Moyez Dharsee]] ||Senior Bioinformatics Research Programmer ||Jan.2007 ||Protein interaction prediction || ||<style="text-align: center;"> {{attachment:Laetitia.jpg}} ||[[LaetitiaMorrison|Laetitia Morrison]] ||Bioinformatics Research Programmer ||Sep.2007 ||Integrative Biology of Yeast || ||<style="text-align: center;"> ||[[RuthIsserlin|Ruth Isserlin]] ||Bioinformatics Research Programmer (co-supervised with Andrew Emili) ||Nov.2007 ||Active cell map || |
||<class="table-header">Bader Lab ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:gary.png}} ||[[GaryBader|Gary Bader]] ||Professor ||Apr.2006 || || ||<class="table-header">Post docs ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:scott.jpg}} ||[[ScottZuyderduyn|Scott Zuyderduyn]] || ||Aug.2011 ||Cancer genomics || ||<style="text-align:center;"> {{attachment:mhelmy3.png}} ||[[MohamedHelmy|Mohamed Helmy]] || ||Sep. 2013 ||Cancer genomics, Cancer mutations analysis || ||<style="text-align:center;"> {{attachment:Florian.png}} ||[[FlorianGoebels|Florian Goebels]] || ||Jan. 2015 ||Protein Protein interactions || ||<style="text-align:center;"> {{attachment:Shraddha.jpg}} ||[[ShraddhaPai|Shraddha Pai]] || ||Jan. 2015 ||Predicting disease risk/prognosis in mental illness || ||<class="table-header">Graduate Students ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:shobhit.png}} ||[[ShobhitJain|Shobhit Jain]] ||Computer Science ||Sep.2008 ||Domain interaction prediction || ||<style="text-align:center;"> {{attachment:Brian.jpg}} ||[[BrianLaw|Brian Law]] ||Computer Science ||Sept.2010 ||Network alignment || ||<style="text-align:center;"> {{attachment:Patryk.jpg}} ||[[Patryk Skowron]] ||Laboratory Medicine and Pathobiology (co-supervised with [[http://www.sickkids.ca/AboutSickKids/Directory/People/T/Michael-D-Taylor.html|Michael D. Taylor]]) ||Sept.2013 ||Cancer genomics of medulloblastoma || ||<style="text-align:center;"> {{attachment:Lucas.jpg}} ||[[LucasHu|Lucas Hu]] ||Molecular Genetics (co-supervised with [[http://www.utoronto.ca/emililab/|Andrew Emili]]) ||Sept.2013 ||WormMap || ||<style="text-align:center;"> {{attachment:StuartPhoto.JPG}} ||[[StuartMatanLithwick|Stuart Matan-Lithwick]] ||Laboratory Medicine & Pathobiology (co-supervised with [[http://www.sickkids.ca/AboutSickKids/Directory/People/T/Michael-D-Taylor.html|Michael D. Taylor]]) ||May 2015 ||- || ||<style="text-align:center;"> {{attachment:tim.jpg}} ||[[TimothyLau|Timothy Lau]] || Computer Science || Sept 2015 || Domain-peptide interaction || ||<style="text-align:center;"> {{attachment:Catherine.jpeg|width:"100"}} ||[[Catherine Ross|Catherine Ross]] ||Second year Master's student in the Boone/Andrews lab (co-supervised by Gary Bader)|| Dec.2015 ||Computational pipeline to determine signs of natural positive selection for certain biological pathways among different human ethnic populations.|| ||<style="text-align:center;"> {{attachment:binnes.jpg}} ||[[BrendanInnes|Brendan Innes]] || Molecular Genetics || Jan 2016 || Intercellular Signalling || ||<style="text-align:center;"> {{attachment:hamed.jpg}} ||[[Hamed Heydari |Hamed Heydari ]] || Molecular Genetics || Jan 2016 || || ||<style="text-align:center;"> {{attachment:duncan.jpg}} ||[[Duncan Forster|Duncan Forster]] || ||Feb. 2017 ||Molecular Genetics || ||<style="text-align:center;"> {{attachment:gurnit.jpg}} ||[[Gurnit Atwal |Gurnit Atwal ]] || Molecular Genetics || Jan 2017 || || ||<class="table-header">Research Staff ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:ruth.png}} ||[[RuthIsserlin|Ruth Isserlin]] ||Research Staff ||Nov.2007 || Active cell map <<BR>>(Co-supervised with Andrew Emili) || ||<style="text-align:center;"> {{attachment:Veronique.png}} ||[[VeroniqueVoisin|Veronique Voisin]] ||Research Associate ||Jan.2011 ||Pathway Analysis of Cancer Stem Cells || ||<style="text-align:center;"> {{attachment:Shirley.jpg}} ||[[ShirleyHui|Shirley Hui]] ||Research Associate ||May.2014 ||Medical Decision Making || ||<style="text-align:center;"> {{attachment:Changjiang.jpg}} ||[[ChangjiangXu|Changjiang Xu]] ||Research Associate ||June 2014 ||Statistical data analysis || ||<style="text-align:center;"> {{attachment:AhmadShah.JPG}} ||[[AhmadShah|Ahmad Shah]] ||Research Staff ||Sept.2014 ||- || ||<style="text-align:center;"> {{attachment:Jeff.jpg}} ||[[JeffLiu|Jeff Liu]] ||Research Associate ||November 2015 ||Pathway Analysis of Cancer Stem Cells || ||<style="text-align:center;"> {{attachment:MAC_UTO.jpg}} ||[[MariaAbouChakra|Maria Abou Chakra]] ||Research Associate ||July 2016 ||Modeling Organoid Development || ||<class="table-header">Software Developers ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Christian.jpg}} ||[[ChristianLopes|Christian Lopes]] ||Sep.2008 ||||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]] [[http://www.cytoscape.org|Cytoscape]] || ||<style="text-align:center;"> {{attachment:qrcode.png|Max Franz|height=120 width=120}} ||[[MaxFranz|Max Franz]] ||May 2010 (formerly U of Waterloo co-op student Jan-May 2009 and Sept-Dec 2009) ||||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:IgorRodchenkov.jpg}} ||[[IgorRodchenkov|Igor Rodchenkov]] ||Nov.2008 ||||<style="text-align:center;">[[http://www.pathwaycommons.org|Pathway Commons]]<<BR>>[[http://www.biopax.org|BioPAX]] [[http://www.cytoscape.org|Cytoscape]] || ||<style="text-align:center;"> {{attachment:Harold.jpg}} ||[[HaroldRodriguez|Harold Rodriguez]] ||Feb.2009 ||||<style="text-align:center;">[[http://baderlab.org/Intranet/SysAdmin|Systems Administrator]]<<BR>> [[http://baderlab.org/Genemania/BuildProcess|Build Process]] <<BR>> [[http://www.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:mike-pic.jpg|Mike Kucera|width=150 height=150}} ||[[MikeKucera|Mike Kucera]] ||Sept.2014 ||||<style="text-align:center;">[[http://www.cytoscape.org|Cytoscape]] || ||<style="text-align:center;"> {{attachment:dylan.jpg||width="150"}}||[[Dylan Fong]]||Nov. 2016- Nov. 2017||||<style="text-align:center;">[[http://www.pathwaycommons.org|Pathway Commons]]|| ||<class="table-header">Financial Staff ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Shan.jpg||width="200"}} ||[[ShanGao|Shan Gao]] || Jun.2016 ||||<style="text-align:center;">Financial and Research Assistant || ||<class="table-header">Undergraduate Students ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Alex.jpg|Alexander Li|width=150 height=150}} ||[[AlexanderLi|Alexander Li]] ||University of Toronto||May- August 2017 ||||<style="text-align:center;">[[http://www.pathwaycommons.org|Pathway Commons]]|||| ||<style="text-align:center;"> {{attachment:John.jpg|}}||[[John Giorgi]]||University of Ottawa||May- August 2017||||<style="text-align:center;">[[http://www.pathwaycommons.org|Pathway Commons]]|| |
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| ||<#e0e0ff style="font-weight: bold; text-align: center;">[[Members/Photos|More Photos]] || | ||<class="table-header">[[Members/Photos|More Photos]] || |
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| ||<#e0e0ff style="font-weight: bold; text-align: center;">Software Engineers ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> {{attachment:matan.png}} ||Michael Matan ||Senior Bioinformatics Research Programmer ||Jan-Aug.2007 ||Integrative Biology of Yeast || ||<#e0e0ff style="font-weight: bold; text-align: center;">Lab Technicians ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> {{attachment:lianet.jpg}} ||Lianet Lopez ||Technician (co-supervised with [[http://www.utoronto.ca/boonelab/|Charlie Boone]]) ||Oct.2007-Jun.2008 ||Protein interaction screening || ||<#e0e0ff style="font-weight: bold; text-align: center;">Undergraduate Students ||||||||<#e0e0ff style="text-align: center;"> || ||<style="text-align: center;"> {{attachment:ben.jpg}} ||[[BenElliott|Benjamin Elliott]] ||University of Toronto Electrical Engineering ||May-August.2008 ||Yeast systems analysis || ||<style="text-align: center;"> {{attachment:ioana.jpg}} ||[[IoanaIvan|Ioana Ivan]] ||University of Toronto Computational Biology 299Y student (co-supervised with [[http://biochemistry.utoronto.ca/reithmeier/bch.html|Reinhart Reithmeier]]) ||Sep.2006-Aug.2007 ||Membrane interactions with PDZ domains || ||<style="text-align: center;"> {{attachment:kevin.jpg}} ||[[KevinHa|Kevin Ha]] ||University of Waterloo Co-op Bioinformatics (co-supervised with [[http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html|Steve Gallinger]]) ||Sep-Dec.2006,<<BR>>Apr-Aug.2007 ||Colorectal Cancer biomarkers || ||<style="text-align: center;"> {{attachment:stacy.png}} ||[[StacyHung|Stacy Hung]] ||Bioinformatics, UWaterloo ||Apr-Aug.2007 ||Protein interaction prediction || ||<style="text-align: center;"> {{attachment:natalie.png}} ||Natalie Yeung ||University of Toronto Immunology, 4th year ||Jan-July.2007 ||Cytoscape usability || ||<style="text-align: center;"> {{attachment:aseel2.png}} ||Aseel Al Dallal ||University of Waterloo Co-op Bioinformatics (co-supervised with [[http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html|Steve Gallinger]]) ||Jan-Apr.2007 ||Colorectal Cancer biomarkers || ||<style="text-align: center;"> {{attachment:faisal.gif}} ||Faisal Naqib ||University of Waterloo Faculty of Math(co-supervised with [[http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html|Steve Gallinger]]) ||May-Aug.2006 ||Colorectal Cancer biomarkers || ||<#e0e0ff style="font-weight: bold; text-align: center;">Project Students ||||||||<#e0e0ff style="text-align: center;"> || ||||<style="text-align: center;">Monica Raj ||University of British Columbia ||July.2007-April.2008 ||Predicting in vivo PDZ domain protein interactions (4th year research project) || ||||<style="text-align: center;">Maital Ashkenazi ||Hebrew University, Jerusalem ||Summer 2007 ||Enhanced search feature for Cytoscape (Google Summer of Code with David States and Allan Kuchinsky) || ||||<style="text-align: center;">Anna Rukosuyeva ||University of Toronto, Computer Science ||Sep.2007-Dec.2008 ||Viewing compound nodes in Cytoscape (4th year project course) || ||||<style="text-align: center;">Victoria Mui ||University of Toronto, Computer Science ||Summer 2008 ||Label layout algorithm for Cytoscape (Google Summer of Code with Greg Wilson) || |
||<class="table-header">Post Docs ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Juri_Reimand_th.jpg}} ||[[JuriReimand|Jüri Reimand]] || ||Jan.2011-July.2015 ||Cancer genomics || ||<style="text-align:center;"> {{attachment:Florence.jpg}} ||Florence Cavalli ||with Michael Taylor ||Dec.2011 - June.2015 ||Cancer genomics || ||<style="text-align:center;"> {{attachment:Andrea.jpg}} ||Andrea Uetrecht ||with Jason Moffat ||Feb.2012-Aug.2015 ||Protein interactions || ||<style="text-align:center;"> {{attachment:RonAmmar/ron_profile.jpg|Ron|width="250"}} ||[[RonAmmar|Ron Ammar]] || ||Aug. 2013-Feb.2015 ||MedSavant and The Sick Kids Genome Clinic || ||<style="text-align:center;"> {{attachment:Deena.jpg|alt text|width="150"}} ||Deena Gendoo ||with Annie Huang ||Sep. 2012 - Oct. 2013 ||Cancer genomics on Pediatric Brain Tumours || ||<style="text-align:center;"> {{attachment:iain.png}} ||[[IainWallace|Iain Wallace]] ||Co-supervised with [[http://chemogenomics.med.utoronto.ca/|Guri Giaever and Corey Nislow]] ||Oct.2007-Mar.2012 ||Chemical genomics in yeast || ||<style="text-align:center;"> {{attachment:xiaofeng.jpeg}} ||Xiaofeng Xin || ||Jul.2010-Nov.2011 ||Protein-protein interactions in C. elegans || ||<style="text-align:center;"> {{attachment:magali.png}} ||[[MagaliMichaut|Magali Michaut]] || ||Jan.2009-Nov.2011 ||Multiple perturbations in yeast || ||<style="text-align:center;"> {{attachment:DanieleM.jpg}} ||[[DanieleMerico|Daniele Merico]] ||Co-supervised with [[http://www.utoronto.ca/emililab/|Andrew Emili]] ||Jan.2009-Apr.2011 (formerly visiting student since Nov.2007) ||Active cell map || ||<style="text-align:center;"> {{attachment:oliver.jpg}} ||[[OliverStueker|Oliver Stueker]] || ||Dec.2008-Apr.2010 ||Cancer Stem Cells / Active cell map || ||<style="text-align:center;"> {{attachment:david.jpg}} ||[[DavidGfeller|David Gfeller]] || ||Feb.2008-Feb.2010 ||Specificity and robustness in protein interaction networks || ||<class="table-header">Graduate Students ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Rosario.png}} ||[[Rosario Distefano|Rosario Distefano]] || Visiting student from University of Verona, Italy||Jan-Jul 2016 ||Biological pathway simulation|| ||<style="text-align:center;"> {{attachment:davids_tn.jpg}} ||[[DavidShih|David Shih]] ||Laboratory Medicine and Pathobiology (co-supervised with [[http://www.sickkids.ca/AboutSickKids/Directory/People/T/Michael-D-Taylor.html|Michael D. Taylor]]) ||Jan.2011-Aug.2015 ||Cancer genomics of medulloblastoma || ||<style="text-align:center;"> {{attachment:olhovsky.jpg}} ||[[http://baderlab.org/MarinaOlhovsky|Marina Olhovsky]] ||Part-time M. Sc. student (co-supervised with [[http://www.yorku.ca/ronp/|Ron Pearlman]]); software engineer at [[http://pawsonlab.mshri.on.ca|Tony Pawson]]'s lab ||Jan. 2012-Aug.2015 ||Computational predictions of protein-protein interactions || ||<style="text-align:center;"> {{attachment:asha.JPG}} ||[[AshaRostamianfar|Asha Rostamianfar]] ||Computer Science ||Sept.2013-May.2015 ||- || ||<style="text-align:center;"> {{attachment:Pegah.png||height="100px",width="120px"}} ||[[PegahKhosravi|Pegah Khosravi]] ||Bioinformatics ||Oct.2012 - Sep.2014 ||Gene expression regulation || ||<style="text-align:center;"> {{attachment:omarwagih.jpg}} ||[[OmarWagih|Omar Wagih]] ||Computer Science ||Sept.2012 - Dec.2013 ||Cancer genomics || ||<style="text-align:center;"> {{attachment:RonAmmar/ron_profile.jpg|Ron|width="250"}} ||[[RonAmmar|Ron Ammar]] ||Molecular Genetics (co-supervised with Corey Nislow and Guri Giaever) ||Sep. 2008 - July 2013 ||Genomics technology in yeast, chemical screening || ||<style="text-align:center;"> {{attachment:Shirley.jpg}} ||[[ShirleyHui|Shirley Hui]] ||Molecular Genetics ||May.2007 - April 2013 ||Domain specificity || ||<style="text-align:center;"> {{attachment:anastasija.jpg}} ||[[AnastasijaBaryshnikova|Anastasija Baryshnikova]] ||Molecular Genetics (co-supervised with [[http://www.utoronto.ca/boonelab/|Charlie Boone]]) ||May.2006-Oct.2012 ||Genetic interactions in yeast || ||<style="text-align:center;"> {{attachment:MohammedAlshalalfa.jpg}} ||[[Mohammed Alshalalfa]] ||Visiting student from University of Calgary ||May.2011-Dec 2011 ||Master regulators identification using network biology || ||<style="text-align:center;"> {{attachment:sambourg.png}} ||[[LaureSambourg|Laure Sambourg]] ||[[http://www-timc.imag.fr/?lang=en|Laboratoire TIMC-IMAG]], France, Visiting student ||June.2011-Dec.2011 ||Cancer interactome and alternative splicing || ||<style="text-align:center;"> {{attachment:Chris.jpg}} ||[[ChrisTan|Chris Tan]] ||Molecular Genetics (co-supervised with [[http://pawsonlab.mshri.on.ca/|Tony Pawson]]) ||Jan.2007-Aug.2011 ||Network evolution || ||<style="text-align:center;"> {{attachment:xiaojian.png}} ||[[XiaojianShao|Xiaojian Shao]] ||[[http://www.cau.edu.cn/|China Agricultural University]], China, Visiting student ||Sept.2008-Sept.2010 ||Quantitative interaction prediction || ||<style="text-align:center;"> {{attachment:vuk.png}} ||[[VukPavlovic|Vuk Pavlovic]] ||Molecular Genetics ||May.2007-2011 ||Protein complex detection from networks || ||<class="table-header">Software Developers ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:patrick.jpg||height="116",width="116"}} ||Patrick Magee || ||Oct.2014-Aug.2015 ||||<style="text-align:center;">Pharmacogenetics app, MedSavant || ||<style="text-align:center;"> {{attachment:Khalid.jpg}} ||[[KhalidZhumber|Khalid Zhuberi]] ||Jun.2008-Jan.2015 ||||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:Jason.jpg}} ||[[JasonMontojo|Jason Montojo]] || ||Sep.2008-Aug.2014 ||||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]] [[http://www.cytoscape.org|Cytoscape]] || ||<style="text-align:center;"> {{attachment:Ovi.jpg}} ||[[OviComes|Ovi Comes]] || ||May.2008-Jun.2010 ||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:Rashad.jpg}} ||[[RashadBadrawi|Rashad Badrawi]] || ||Aug.2008-Apr.2010 ||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]]/[[http://www.pathwaycommons.org/pc/|Pathway Commons]] || ||<style="text-align:center;"> {{attachment:Laetitia.jpg}} ||[[LaetitiaMorrison|Laetitia Morrison]] || ||Sep.2007-Dec.2009 ||<style="text-align:center;">Integrative Biology of Yeast || ||<style="text-align:center;"> {{attachment:moyez.png}} ||[[MoyezDharsee|Moyez Dharsee]] || ||Jan.2007-Oct.2008 ||<style="text-align:center;">Protein interaction prediction || ||<style="text-align:center;"> {{attachment:matan.png}} ||Michael Matan || ||Jan-Aug.2007 ||<style="text-align:center;">Integrative Biology of Yeast || ||<class="table-header">Project Manager ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Sylva.jpg}} ||[[SylvaDonaldson|Sylva Donaldson]] ||Project Manager, Coordinator of Training and Outreach ||Jun.2008-Jun.2010 ||[[http://www.genemania.org|GeneMANIA]] || ||<class="table-header">Quality Assurance ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Farzana.jpg}} ||[[FarzanaKazi|Farzana Kazi]] ||QA Analyst ||Jan.2009-Jun.2010 ||[[http://www.genemania.org|GeneMANIA]]/[[http://www.cytoscape.org|Cytoscape]]/[[http://www.pathwaycommons.org/pc/|Pathway Commons]] || ||<class="table-header">Lab Technicians ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Jun.jpg}} ||Jun Gu ||Technician (co-supervised with [[http://www.thedonnellycentre.utoronto.ca/members/sachdev_sidhu.html|Dev Sidhu]]) ||Dec.2010 ||Protein interaction screening || ||<style="text-align:center;"> {{attachment:lianet.jpg}} ||Lianet Lopez ||Technician (co-supervised with [[http://www.utoronto.ca/boonelab/|Charlie Boone]]) ||Oct.2007-Jun.2008 ||Protein interaction screening || ||<class="table-header">Undergraduate Students ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Manfred.jpg|Manfred|width=150 height=150}} ||[[ManfredCheung|Manfred Cheung]] ||University of Waterloo||Jan - April 2017 ||||<style="text-align:center;">[[http://www.pathwaycommons.org|Pathway Commons]]|||| ||<style="text-align:center;"> {{attachment:Peter.jpg|Peter Smith|width=150 height=150}} ||[[PeterSmith|Peter Smith]] ||University of Waterloo||Jan - April 2017 ||||<style="text-align:center;">[[http://www.pathwaycommons.org|Pathway Commons]]|||| ||<style="text-align:center;"> {{attachment:victor.jpg}} ||<style="text-align:center;">[[kofiav|Victor Kofia]] ||University of Toronto ||May-Aug 2013, Sep 2013- Apr 2013, Sep 2014 - Aug.2015 ||Co-Authorship Cytoscape App, Enrichment Map App, 3D molecule visualization for Google Cardboard || ||<style="text-align:center;"> {{attachment:arkady.jpg}} ||<style="text-align:center;">[[ArkadyArk|Arkady Arkhangorodsky]] ||University of Toronto ||July-Aug 2013, June-Sep 2014 ||High dimensional data visualization, EnrichmentMap annotation || ||<style="text-align:center;"> {{attachment:tristan.jpg}} ||<style="text-align:center;">Tristan Frappier-Brinton ||Queen's University ||July - August 2014 ||Pubmed Publication trends || ||<style="text-align:center;"> ||<style="text-align:center;">Soumil Narayan ||McMaster University ||May 2013-Aug 2015 (3 summers) ||Cancer genomics analysis || ||<style="text-align:center;"> {{attachment:Alvin.png|xx.jpg|height="116",width="116"}} ||<style="text-align:center;">Alvin Leung ||Mcgill University ||May 2013-Aug 2014 ||Cytoscape || ||<style="text-align:center;">{{attachment:RuthGraceWong.jpg}} || Ruth Grace Wong ||University of Western Ontario, Computational Biochemistry ||May-Aug 2014 ||MedSavant Pathway View Extension (Google Summer of code 2014) || ||<style="text-align:center;"> ||<style="text-align:center;">[[Nickolas Goncharenko|Nickolas Goncharenko]] ||McMaster University ||May-Aug.2016 ||Biological pathway simulation || ||<style="text-align:center;"> {{attachment:victor.jpg}} ||<style="text-align:center;">[[kofiav|Victor Kofia]] ||University of Toronto ||May-Aug 2013, Sep 2013- Aug.2015 ||Co-Authorship Cytoscape App, Enrichment Map App || ||<style="text-align:center;"> ||<style="text-align:center;">Diana Nicholls ||University of Toronto ||June-Aug 2013 ||Pathguide.org || ||<style="text-align:center;"> {{attachment:yue.jpg}} ||<style="text-align:center;">Yue Dong ||University of Toronto ||Dec.2011 - Sep.2013 ||Cytoscape || ||<style="text-align:center;"> {{attachment:hussam.jpg|xx.jpg|height="116",width="116"}} ||<style="text-align:center;">Hussam Kaka ||University of Toronto ||Sep. 2012 - Aug.2013 ||GeneMANIA || ||<style="text-align:center;"> {{attachment:luke.jpg}} ||<style="text-align:center;">Luke Chang ||Summer Researcher ||June-Aug 2013 ||GeneMANIA || ||<style="text-align:center;"> {{attachment:xx.jpg}} ||[[XiangXing|Xiang Xing]] ||University of Toronto ||May 2010-Aug 2012 ||WW domain prediction, PDZ domain prediction || ||<style="text-align:center;"> {{attachment:adrian.jpg}} ||Adrian Zhu || ||Jan. 2011 ||||<style="text-align:center;">[[http://www.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:Ameen.png}} ||[[AmeenModhafar|Ameen Modhafar]] ||University of Waterloo Systems Design Engineering co-op student ||Jan to Apr.2010 ||Yeast systems analysis || ||<style="text-align:center;"> {{attachment:Anson.jpg}} ||[[AnsonMaitland|Anson Maitland]] ||University of Waterloo Mathematics co-op student ||May to Aug.2009 ||[[http://beta.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:Quentin.jpg}} ||[[QuentinShao|Quentin Shao]] ||McMaster University Applied Mathematics co-op student ||May to Aug.2009 ||[[http://beta.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:Michael.jpg}} ||[[MichaelTsui|Michael Tsui]] ||University of Toronto Bioinformatics ||May to Aug.2009 ||[[http://beta.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:George.jpg}} ||[[GeorgeWright|George Wright]] ||McMaster University Biology and Pharmacology co-op student ||May to Aug.2009 ||[[http://beta.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:Pauline.jpg}} ||[[PaulineChao|Pauline Chao]] ||University of Waterloo ||Jan-May.2009 ||[[http://beta.genemania.org/|GeneMANIA]] || ||<style="text-align:center;"> {{attachment:ben.jpg}} ||[[BenElliott|Benjamin Elliott]] ||University of Toronto Electrical Engineering ||May-August.2008 ||Yeast systems analysis || ||<style="text-align:center;"> {{attachment:ioana.jpg}} ||[[IoanaIvan|Ioana Ivan]] ||University of Toronto Computational Biology 299Y student (co-supervised with [[http://biochemistry.utoronto.ca/reithmeier/bch.html|Reinhart Reithmeier]]) ||Sep.2006-Aug.2007 ||Membrane interactions with PDZ domains || ||<style="text-align:center;"> {{attachment:kevin.jpg}} ||[[KevinHa|Kevin Ha]] ||University of Waterloo Co-op Bioinformatics (co-supervised with [[http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html|Steve Gallinger]]) ||Sep-Dec.2006,<<BR>>Apr-Aug.2007 ||Colorectal Cancer biomarkers || ||<style="text-align:center;"> {{attachment:stacy.png}} ||[[StacyHung|Stacy Hung]] ||Bioinformatics, UWaterloo ||Apr-Aug.2007 ||Protein interaction prediction || ||<style="text-align:center;"> {{attachment:natalie.png}} ||Natalie Yeung ||University of Toronto Immunology, 4th year ||Jan-July.2007 ||Cytoscape usability || ||<style="text-align:center;"> {{attachment:aseel2.png}} ||Aseel Al Dallal ||University of Waterloo Co-op Bioinformatics (co-supervised with [[http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html|Steve Gallinger]]) ||Jan-Apr.2007 ||Colorectal Cancer biomarkers || ||<style="text-align:center;"> {{attachment:faisal.gif}} ||Faisal Naqib ||University of Waterloo Faculty of Math(co-supervised with [[http://www.mshri.on.ca/colorectalcancer/bio_gallinger.html|Steve Gallinger]]) ||May-Aug.2006 ||Colorectal Cancer biomarkers || ||<class="table-header">Project Students ||||||||<class="table-header" style="text-align:center;"> || ||||<style="text-align:center;">Yue Dong ||University of Toronto ||May-Aug 2012 ||App Manager for Cytoscape, Cytoscape Web 2 renderers (Google Summer of Code 2012) || ||||<style="text-align:center;">Bimal Ramdoyal ||University of Toronto ||May-Aug 2011 ||Proteomics analysis (4th year project course) || ||||<style="text-align:center;">Marek Zaluski ||Concordia University, Montreal ||May-Aug 2011 ||HTML5 prototype for Cytoscape Web (Google Summer of Code 2011) || ||||<style="text-align:center;">Yue Dong ||University of Toronto ||May-Aug 2011 ||3D Renderer for Cytoscape (Google Summer of Code 2011) || ||||<style="text-align:center;">Layla Oesper ||University of Wisconsin, Madison, WI ||May-Aug 2010 ||WordCloud Plugin for Cytoscape (Google Summer of Code 2010) || ||||<style="text-align:center;">Monica Raj ||University of British Columbia ||July.2007-April.2008 ||Predicting in vivo PDZ domain protein interactions (4th year research project) || ||||<style="text-align:center;">Maital Ashkenazi ||Hebrew University, Jerusalem ||May-Aug 2007 ||Enhanced search feature for Cytoscape (Google Summer of Code with David States and Allan Kuchinsky) || ||||<style="text-align:center;">Anna Rukosuyeva ||University of Toronto, Computer Science ||Sep.2007-Dec.2008 ||Viewing compound nodes in Cytoscape (4th year project course) || ||||<style="text-align:center;">Victoria Mui ||University of Toronto, Computer Science ||May-Aug 2008 ||Label layout algorithm for Cytoscape (Google Summer of Code with Greg Wilson) || ||<class="table-header">Visiting Scientists ||||||||<class="table-header" style="text-align:center;"> || ||<style="text-align:center;"> {{attachment:Carolyn.jpg|alt text|width="150"}} ||Carolyn Cummins ||Visiting Scientist (Assistant Professor of Pharmacy) ||Nov 2013 ||Pathway and RNA-seq analysis || |
| Line 47: | Line 135: |
| ||<#e0e0ff style="font-weight: bold; text-align: center;">Graduate Rotation Students ||||||<#e0e0ff style="text-align: center;"> || | ||<class="table-header">Graduate Rotation Students ||||||<class="table-header" style="text-align:center;"> || ||Patrick Magee ||Molecular Genetics ||Oct.2014 ||Network/pathway analysis || ||Alyssa Molinaro ||Molecular Genetics ||Sept.2014 ||Pathway analysis || ||Rong Huang ||Molecular Genetics ||Oct.2013 ||Pathway analysis || ||Shixuan Liu ||Molecular Genetics ||Sep.2013 ||Pathway analysis || ||[[HuyNguyen|Huy Nguyen]] ||Molecular Genetics ||Nov.2012 ||Enrichment maps || ||Huayun Hou ||Molecular Genetics ||Oct.2012 ||Pathway analysis || ||Jochen Weile ||Molecular Genetics ||Sep.2011 ||Pathway analysis || ||Akiko Sekikawa ||Molecular Genetics ||Sep.2010 ||Protein interaction network evolution || ||Carl Song ||Molecular Genetics ||Dec.2009 ||Pathway analysis || ||Gavin Wilson ||Molecular Genetics ||Sep.2009 ||Protein interaction network evolution || ||Brad Arshinoff ||Molecular Genetics ||Jan.2009 ||Analyzing yeast high content screening data || ||Devon Radford ||Molecular Genetics ||Nov.2008 ||Predicting genetic interactions in yeast from mutations in cell structure || ||Ron Ammar ||Molecular Genetics ||Oct.2008 ||Predicting active biomolecules in yeast || |
Current Members
Bader Lab |
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Professor |
Apr.2006 |
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Post docs |
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Aug.2011 |
Cancer genomics |
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Sep. 2013 |
Cancer genomics, Cancer mutations analysis |
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Jan. 2015 |
Protein Protein interactions |
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Jan. 2015 |
Predicting disease risk/prognosis in mental illness |
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Graduate Students |
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Computer Science |
Sep.2008 |
Domain interaction prediction |
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|
Computer Science |
Sept.2010 |
Network alignment |
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Laboratory Medicine and Pathobiology (co-supervised with Michael D. Taylor) |
Sept.2013 |
Cancer genomics of medulloblastoma |
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Molecular Genetics (co-supervised with Andrew Emili) |
Sept.2013 |
||||
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Laboratory Medicine & Pathobiology (co-supervised with Michael D. Taylor) |
May 2015 |
- |
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|
Computer Science |
Sept 2015 |
Domain-peptide interaction |
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Second year Master's student in the Boone/Andrews lab (co-supervised by Gary Bader) |
Dec.2015 |
Computational pipeline to determine signs of natural positive selection for certain biological pathways among different human ethnic populations. |
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Molecular Genetics |
Jan 2016 |
Intercellular Signalling |
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Molecular Genetics |
Jan 2016 |
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Feb. 2017 |
Molecular Genetics |
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Molecular Genetics |
Jan 2017 |
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Research Staff |
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Research Staff |
Nov.2007 |
Active cell map |
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Research Associate |
Jan.2011 |
Pathway Analysis of Cancer Stem Cells |
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Research Associate |
May.2014 |
Medical Decision Making |
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Research Associate |
June 2014 |
Statistical data analysis |
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Research Staff |
Sept.2014 |
- |
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Research Associate |
November 2015 |
Pathway Analysis of Cancer Stem Cells |
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Research Associate |
July 2016 |
Modeling Organoid Development |
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Software Developers |
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Sep.2008 |
|||||
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May 2010 (formerly U of Waterloo co-op student Jan-May 2009 and Sept-Dec 2009) |
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Nov.2008 |
|||||
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Feb.2009 |
|||||
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Sept.2014 |
|||||
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Nov. 2016- Nov. 2017 |
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Financial Staff |
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Jun.2016 |
Financial and Research Assistant |
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Undergraduate Students |
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University of Toronto |
May- August 2017 |
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University of Ottawa |
May- August 2017 |
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![[ATTACH]](/Members?action=AttachFile&do=upload_form&ticket=00672f74db.a1685dba9858e1ed18cc9caad6a844b67ad6dd43&target=John.jpg "[ATTACH]"){kind=small}
Past Members
Post Docs |
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|||||
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Jan.2011-July.2015 |
Cancer genomics |
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Florence Cavalli |
with Michael Taylor |
Dec.2011 - June.2015 |
Cancer genomics |
||
|
Andrea Uetrecht |
with Jason Moffat |
Feb.2012-Aug.2015 |
Protein interactions |
||
|
|
Aug. 2013-Feb.2015 |
MedSavant and The Sick Kids Genome Clinic |
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Deena Gendoo |
with Annie Huang |
Sep. 2012 - Oct. 2013 |
Cancer genomics on Pediatric Brain Tumours |
||
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Co-supervised with Guri Giaever and Corey Nislow |
Oct.2007-Mar.2012 |
Chemical genomics in yeast |
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Xiaofeng Xin |
|
Jul.2010-Nov.2011 |
Protein-protein interactions in C. elegans |
||
|
|
Jan.2009-Nov.2011 |
Multiple perturbations in yeast |
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|
Co-supervised with Andrew Emili |
Jan.2009-Apr.2011 (formerly visiting student since Nov.2007) |
Active cell map |
|||
|
|
Dec.2008-Apr.2010 |
Cancer Stem Cells / Active cell map |
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Feb.2008-Feb.2010 |
Specificity and robustness in protein interaction networks |
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Graduate Students |
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Visiting student from University of Verona, Italy |
Jan-Jul 2016 |
Biological pathway simulation |
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Laboratory Medicine and Pathobiology (co-supervised with Michael D. Taylor) |
Jan.2011-Aug.2015 |
Cancer genomics of medulloblastoma |
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|
Part-time M. Sc. student (co-supervised with Ron Pearlman); software engineer at Tony Pawson's lab |
Jan. 2012-Aug.2015 |
Computational predictions of protein-protein interactions |
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|
Computer Science |
Sept.2013-May.2015 |
- |
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|
Bioinformatics |
Oct.2012 - Sep.2014 |
Gene expression regulation |
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|
Computer Science |
Sept.2012 - Dec.2013 |
Cancer genomics |
|||
|
Molecular Genetics (co-supervised with Corey Nislow and Guri Giaever) |
Sep. 2008 - July 2013 |
Genomics technology in yeast, chemical screening |
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|
Molecular Genetics |
May.2007 - April 2013 |
Domain specificity |
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|
Molecular Genetics (co-supervised with Charlie Boone) |
May.2006-Oct.2012 |
Genetic interactions in yeast |
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|
Visiting student from University of Calgary |
May.2011-Dec 2011 |
Master regulators identification using network biology |
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|
Laboratoire TIMC-IMAG, France, Visiting student |
June.2011-Dec.2011 |
Cancer interactome and alternative splicing |
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|
Molecular Genetics (co-supervised with Tony Pawson) |
Jan.2007-Aug.2011 |
Network evolution |
|||
|
China Agricultural University, China, Visiting student |
Sept.2008-Sept.2010 |
Quantitative interaction prediction |
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|
Molecular Genetics |
May.2007-2011 |
Protein complex detection from networks |
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Software Developers |
|
|||||
|
Patrick Magee |
|
Oct.2014-Aug.2015 |
Pharmacogenetics app, MedSavant |
||
|
Jun.2008-Jan.2015 |
|||||
|
|
Sep.2008-Aug.2014 |
||||
|
|
May.2008-Jun.2010 |
||||
|
|
Aug.2008-Apr.2010 |
||||
|
|
Sep.2007-Dec.2009 |
Integrative Biology of Yeast |
|||
|
|
Jan.2007-Oct.2008 |
Protein interaction prediction |
|||
|
Michael Matan |
|
Jan-Aug.2007 |
Integrative Biology of Yeast |
||
Project Manager |
|
|||||
|
Project Manager, Coordinator of Training and Outreach |
Jun.2008-Jun.2010 |
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Quality Assurance |
|
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|
QA Analyst |
Jan.2009-Jun.2010 |
||||
Lab Technicians |
|
|||||
|
Jun Gu |
Technician (co-supervised with Dev Sidhu) |
Dec.2010 |
Protein interaction screening |
||
|
Lianet Lopez |
Technician (co-supervised with Charlie Boone) |
Oct.2007-Jun.2008 |
Protein interaction screening |
||
Undergraduate Students |
|
|||||
|
University of Waterloo |
Jan - April 2017 |
||||
|
University of Waterloo |
Jan - April 2017 |
||||
|
University of Toronto |
May-Aug 2013, Sep 2013- Apr 2013, Sep 2014 - Aug.2015 |
Co-Authorship Cytoscape App, Enrichment Map App, 3D molecule visualization for Google Cardboard |
|||
|
University of Toronto |
July-Aug 2013, June-Sep 2014 |
High dimensional data visualization, EnrichmentMap annotation |
|||
|
Tristan Frappier-Brinton |
Queen's University |
July - August 2014 |
Pubmed Publication trends |
||
|
Soumil Narayan |
McMaster University |
May 2013-Aug 2015 (3 summers) |
Cancer genomics analysis |
||
|
Alvin Leung |
Mcgill University |
May 2013-Aug 2014 |
Cytoscape |
||
|
Ruth Grace Wong |
University of Western Ontario, Computational Biochemistry |
May-Aug 2014 |
MedSavant Pathway View Extension (Google Summer of code 2014) |
||
|
McMaster University |
May-Aug.2016 |
Biological pathway simulation |
|||
|
University of Toronto |
May-Aug 2013, Sep 2013- Aug.2015 |
Co-Authorship Cytoscape App, Enrichment Map App |
|||
|
Diana Nicholls |
University of Toronto |
June-Aug 2013 |
Pathguide.org |
||
|
Yue Dong |
University of Toronto |
Dec.2011 - Sep.2013 |
Cytoscape |
||
|
Hussam Kaka |
University of Toronto |
Sep. 2012 - Aug.2013 |
GeneMANIA |
||
|
Luke Chang |
Summer Researcher |
June-Aug 2013 |
GeneMANIA |
||
|
University of Toronto |
May 2010-Aug 2012 |
WW domain prediction, PDZ domain prediction |
|||
|
Adrian Zhu |
|
Jan. 2011 |
|||
|
University of Waterloo Systems Design Engineering co-op student |
Jan to Apr.2010 |
Yeast systems analysis |
|||
|
University of Waterloo Mathematics co-op student |
May to Aug.2009 |
||||
|
McMaster University Applied Mathematics co-op student |
May to Aug.2009 |
||||
|
University of Toronto Bioinformatics |
May to Aug.2009 |
||||
|
McMaster University Biology and Pharmacology co-op student |
May to Aug.2009 |
||||
|
University of Waterloo |
Jan-May.2009 |
||||
|
University of Toronto Electrical Engineering |
May-August.2008 |
Yeast systems analysis |
|||
|
University of Toronto Computational Biology 299Y student (co-supervised with Reinhart Reithmeier) |
Sep.2006-Aug.2007 |
Membrane interactions with PDZ domains |
|||
|
University of Waterloo Co-op Bioinformatics (co-supervised with Steve Gallinger) |
Sep-Dec.2006, |
Colorectal Cancer biomarkers |
|||
|
Bioinformatics, UWaterloo |
Apr-Aug.2007 |
Protein interaction prediction |
|||
|
Natalie Yeung |
University of Toronto Immunology, 4th year |
Jan-July.2007 |
Cytoscape usability |
||
|
Aseel Al Dallal |
University of Waterloo Co-op Bioinformatics (co-supervised with Steve Gallinger) |
Jan-Apr.2007 |
Colorectal Cancer biomarkers |
||
|
Faisal Naqib |
University of Waterloo Faculty of Math(co-supervised with Steve Gallinger) |
May-Aug.2006 |
Colorectal Cancer biomarkers |
||
Project Students |
|
|||||
Yue Dong |
University of Toronto |
May-Aug 2012 |
App Manager for Cytoscape, Cytoscape Web 2 renderers (Google Summer of Code 2012) |
|||
Bimal Ramdoyal |
University of Toronto |
May-Aug 2011 |
Proteomics analysis (4th year project course) |
|||
Marek Zaluski |
Concordia University, Montreal |
May-Aug 2011 |
HTML5 prototype for Cytoscape Web (Google Summer of Code 2011) |
|||
Yue Dong |
University of Toronto |
May-Aug 2011 |
3D Renderer for Cytoscape (Google Summer of Code 2011) |
|||
Layla Oesper |
University of Wisconsin, Madison, WI |
May-Aug 2010 |
WordCloud Plugin for Cytoscape (Google Summer of Code 2010) |
|||
Monica Raj |
University of British Columbia |
July.2007-April.2008 |
Predicting in vivo PDZ domain protein interactions (4th year research project) |
|||
Maital Ashkenazi |
Hebrew University, Jerusalem |
May-Aug 2007 |
Enhanced search feature for Cytoscape (Google Summer of Code with David States and Allan Kuchinsky) |
|||
Anna Rukosuyeva |
University of Toronto, Computer Science |
Sep.2007-Dec.2008 |
Viewing compound nodes in Cytoscape (4th year project course) |
|||
Victoria Mui |
University of Toronto, Computer Science |
May-Aug 2008 |
Label layout algorithm for Cytoscape (Google Summer of Code with Greg Wilson) |
|||
Visiting Scientists |
|
|||||
|
Carolyn Cummins |
Visiting Scientist (Assistant Professor of Pharmacy) |
Nov 2013 |
Pathway and RNA-seq analysis |
||
Graduate Rotation Students |
|
||
Patrick Magee |
Molecular Genetics |
Oct.2014 |
Network/pathway analysis |
Alyssa Molinaro |
Molecular Genetics |
Sept.2014 |
Pathway analysis |
Rong Huang |
Molecular Genetics |
Oct.2013 |
Pathway analysis |
Shixuan Liu |
Molecular Genetics |
Sep.2013 |
Pathway analysis |
Molecular Genetics |
Nov.2012 |
Enrichment maps |
|
Huayun Hou |
Molecular Genetics |
Oct.2012 |
Pathway analysis |
Jochen Weile |
Molecular Genetics |
Sep.2011 |
Pathway analysis |
Akiko Sekikawa |
Molecular Genetics |
Sep.2010 |
Protein interaction network evolution |
Carl Song |
Molecular Genetics |
Dec.2009 |
Pathway analysis |
Gavin Wilson |
Molecular Genetics |
Sep.2009 |
Protein interaction network evolution |
Brad Arshinoff |
Molecular Genetics |
Jan.2009 |
Analyzing yeast high content screening data |
Devon Radford |
Molecular Genetics |
Nov.2008 |
Predicting genetic interactions in yeast from mutations in cell structure |
Ron Ammar |
Molecular Genetics |
Oct.2008 |
Predicting active biomolecules in yeast |
Adrian Verster |
Molecular Genetics |
Sept.2008 |
Predicting trigenic synthetic lethalic in yeast |
Harshika Seepany |
Medical Genetics |
Oct.2007 |
PDZ protein interaction specificity analysis |
Shirley Hui |
Medical Genetics |
Mar.2007 |
Gene expression correlation analysis |
Vuk Pavlovic |
Medical Genetics |
Feb.2007 |
Protein complex detection |
Trevis Alleyne |
Medical Genetics |
Nov.2006 |
Protein interactions involving SH3 domains - specificity prediction |
Graham Cromar |
Medical Genetics |
Oct.2006 |
Protein interactions involving SH3 domains - interaction prediction |
Chris Tan |
Medical Genetics |
Sep.2006 |
Protein interactions involving SH3 domains - specificity analysis |